ENCFF211GIU

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR183YQY
Description: Part of ENCODE experiment ENCSR183YQY. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000756336.1 ENST00000756336.1_98_132_+ 98–132 32975.56 17.01 161.04 26.22 ENST00000756336 lncRNA transverse colon (Tissue)
ENST00000756336.1 ENST00000756336.1_98_130_+ 98–130 101502.25 52.34 495.68 77.36 ENST00000756336 lncRNA transverse colon (Tissue)
ENST00000756336.1 ENST00000756336.1_107_172_+ 107–172 1093.07 0.56 5.34 31.66 ENST00000756336 lncRNA transverse colon (Tissue)
ENST00000756336.1 ENST00000756336.1_98_125_+ 98–125 6358.69 3.28 31.05 25.49 ENST00000756336 lncRNA transverse colon (Tissue)
ENST00000756336.1 ENST00000756336.1_98_172_+ 98–172 881.00 0.45 4.30 100.0 ENST00000756336 lncRNA transverse colon (Tissue)
ENST00000756336.1 ENST00000756336.1_109_172_+ 109–172 2773.14 1.43 13.54 66.94 ENST00000756336 lncRNA transverse colon (Tissue)
ENST00000756452.1 ENST00000756452.1_116_129_+ 116–129 39.00 12.66 0.19 100.0 ENST00000756452 lncRNA transverse colon (Tissue)
ENST00000760093.1 ENST00000760093.1_80_108_+ 80–108 12209.00 49.88 59.62 100.0 ENST00000760093 lncRNA transverse colon (Tissue)
ENST00000760093.1 ENST00000760093.1_77_108_+ 77–108 2350.00 9.60 11.48 100.0 ENST00000760093 lncRNA transverse colon (Tissue)
ENST00000760397.1 ENST00000760397.1_331_421_+ 331–421 1030.00 81.94 5.03 94.32 SNHG14-356 lncRNA transverse colon (Tissue)
ENST00000762395.1 ENST00000762395.1_325_354_+ 325–354 176794.00 12.03 863.37 81.7 LINC02806-241 lncRNA transverse colon (Tissue)
ENST00000762395.1 ENST00000762395.1_325_377_+ 325–377 75.00 0.01 0.37 100.0 LINC02806-241 lncRNA transverse colon (Tissue)
ENST00000762395.1 ENST00000762395.1_397_430_+ 397–430 1.00 0.00 0.00 100.0 LINC02806-241 lncRNA transverse colon (Tissue)
ENST00000762395.1 ENST00000762395.1_324_357_+ 324–357 1210935.00 82.39 5913.58 92.6 LINC02806-241 lncRNA transverse colon (Tissue)
ENST00000766977.1 ENST00000766977.1_604_615_+ 604–615 1183.00 92.57 5.78 100.0 EHBP1-AS1-210 lncRNA transverse colon (Tissue)
ENST00000770398.1 ENST00000770398.1_425_437_+ 425–437 797.00 10.03 3.89 100.0 ENST00000770398 lncRNA transverse colon (Tissue)
ENST00000770398.1 ENST00000770398.1_481_509_+ 481–509 241.00 3.03 1.18 100.0 ENST00000770398 lncRNA transverse colon (Tissue)
ENST00000770398.1 ENST00000770398.1_425_456_+ 425–456 5808.00 73.07 28.36 100.0 ENST00000770398 lncRNA transverse colon (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1611_+ 1591–1611 589.00 0.56 2.88 100.0 ENST00000771298 lncRNA transverse colon (Tissue)
ENST00000771298.1 ENST00000771298.1_448_479_+ 448–479 1012.00 0.97 4.94 100.0 ENST00000771298 lncRNA transverse colon (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1621_+ 1591–1621 90345.00 86.51 441.20 95.1 ENST00000771298 lncRNA transverse colon (Tissue)
ENST00000771298.1 ENST00000771298.1_485_522_+ 485–522 602.00 0.58 2.94 100.0 ENST00000771298 lncRNA transverse colon (Tissue)
ENST00000772672.1 ENST00000772672.1_26_113_+ 26–113 307.00 48.96 1.50 100.0 ENST00000772672 lncRNA transverse colon (Tissue)
ENST00000772672.1 ENST00000772672.1_91_113_+ 91–113 25.00 3.99 0.12 100.0 ENST00000772672 lncRNA transverse colon (Tissue)
ENST00000773843.1 ENST00000773843.1_422_435_+ 422–435 500.00 22.36 2.44 100.0 ENST00000773843 lncRNA transverse colon (Tissue)