ENCFF211GIU

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR183YQY
Description: Part of ENCODE experiment ENCSR183YQY. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000722183.1 ENST00000722183.1_126_158_+ 126–158 560.00 4.25 2.73 100.0 ENST00000722183 lncRNA transverse colon (Tissue)
ENST00000726427.1 ENST00000726427.1_819_841_+ 819–841 11.00 91.67 0.05 100.0 MIR34BHG-202 lncRNA transverse colon (Tissue)
ENST00000730292.1 ENST00000730292.1_241_262_+ 241–262 3242.00 76.84 15.83 81.29 THBS3-AS1-228 lncRNA transverse colon (Tissue)
ENST00000732834.1 ENST00000732834.1_2132_2152_+ 2132–2152 662.00 39.52 3.23 100.0 MIR200CHG-202 lncRNA transverse colon (Tissue)
ENST00000732834.1 ENST00000732834.1_1719_1741_+ 1719–1741 496.00 29.61 2.42 100.0 MIR200CHG-202 lncRNA transverse colon (Tissue)
ENST00000738116.1 ENST00000738116.1_64_138_+ 64–138 2109.00 43.05 10.30 100.0 SNHG16-266 lncRNA transverse colon (Tissue)
ENST00000738116.1 ENST00000738116.1_111_138_+ 111–138 347.00 7.08 1.69 100.0 SNHG16-266 lncRNA transverse colon (Tissue)
ENST00000738116.1 ENST00000738116.1_64_97_+ 64–97 87.00 1.78 0.42 100.0 SNHG16-266 lncRNA transverse colon (Tissue)
ENST00000738116.1 ENST00000738116.1_88_138_+ 88–138 53.00 1.08 0.26 100.0 SNHG16-266 lncRNA transverse colon (Tissue)
ENST00000741826.1 ENST00000741826.1_184_205_+ 184–205 10.00 31.25 0.05 100.0 MEG8-261 lncRNA transverse colon (Tissue)
ENST00000743202.1 ENST00000743202.1_560_577_+ 560–577 68.00 16.96 0.33 100.0 NR2F2-AS1-327 lncRNA transverse colon (Tissue)
ENST00000747675.1 ENST00000747675.1_804_853_+ 804–853 87.00 0.26 0.42 40.85 ENST00000747675 lncRNA transverse colon (Tissue)
ENST00000747675.1 ENST00000747675.1_802_853_+ 802–853 126.00 0.37 0.62 37.61 ENST00000747675 lncRNA transverse colon (Tissue)
ENST00000747675.1 ENST00000747675.1_817_853_+ 817–853 24814.00 73.74 121.18 100.0 ENST00000747675 lncRNA transverse colon (Tissue)
ENST00000747675.1 ENST00000747675.1_800_853_+ 800–853 122.00 0.36 0.60 49.19 ENST00000747675 lncRNA transverse colon (Tissue)
ENST00000747675.1 ENST00000747675.1_812_853_+ 812–853 1667.00 4.95 8.14 100.0 ENST00000747675 lncRNA transverse colon (Tissue)
ENST00000748458.1 ENST00000748458.1_161_188_+ 161–188 11727.00 43.05 57.27 66.05 SNHG26-250 lncRNA transverse colon (Tissue)
ENST00000748458.1 ENST00000748458.1_161_230_+ 161–230 4257.00 15.63 20.79 88.98 SNHG26-250 lncRNA transverse colon (Tissue)
ENST00000752259.1 ENST00000752259.1_405_425_+ 405–425 74.00 13.21 0.36 100.0 LINC02422-207 lncRNA transverse colon (Tissue)
ENST00000753088.1 ENST00000753088.1_508_523_+ 508–523 724.00 9.30 3.54 100.0 ENST00000753088 lncRNA transverse colon (Tissue)
ENST00000753088.1 ENST00000753088.1_508_542_+ 508–542 1139.00 14.63 5.56 100.0 ENST00000753088 lncRNA transverse colon (Tissue)
ENST00000756336.1 ENST00000756336.1_98_127_+ 98–127 20813.38 10.73 101.64 64.31 ENST00000756336 lncRNA transverse colon (Tissue)
ENST00000756336.1 ENST00000756336.1_133_172_+ 133–172 1140.00 0.59 5.57 100.0 ENST00000756336 lncRNA transverse colon (Tissue)
ENST00000756336.1 ENST00000756336.1_117_172_+ 117–172 681.00 0.35 3.33 100.0 ENST00000756336 lncRNA transverse colon (Tissue)
ENST00000756336.1 ENST00000756336.1_137_172_+ 137–172 243.00 0.13 1.19 100.0 ENST00000756336 lncRNA transverse colon (Tissue)