ENCFF211GIU

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR183YQY
Description: Part of ENCODE experiment ENCSR183YQY. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000650189.1 ENST00000650189.1_167_187_+ 167–187 4133.00 41.50 20.18 100.0 DNM3OS-205 lncRNA transverse colon (Tissue)
ENST00000650796.1 ENST00000650796.1_157_198_+ 157–198 4.00 0.01 0.02 100.0 GAS5-230 retained intron transverse colon (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2910_+ 2858–2910 137.00 0.28 0.67 100.0 GAS5-230 retained intron transverse colon (Tissue)
ENST00000650796.1 ENST00000650796.1_709_770_+ 709–770 273.00 0.55 1.33 100.0 GAS5-230 retained intron transverse colon (Tissue)
ENST00000650796.1 ENST00000650796.1_1648_1723_+ 1648–1723 18.00 0.04 0.09 75.0 GAS5-230 retained intron transverse colon (Tissue)
ENST00000650796.1 ENST00000650796.1_137_198_+ 137–198 2236.00 4.54 10.92 93.01 GAS5-230 retained intron transverse colon (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1418_+ 1391–1418 20.00 0.04 0.10 100.0 GAS5-230 retained intron transverse colon (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2663_+ 2631–2663 3282.00 6.67 16.03 100.0 GAS5-230 retained intron transverse colon (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1103_+ 1048–1103 8.00 0.02 0.04 100.0 GAS5-230 retained intron transverse colon (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1108_+ 1048–1108 13955.00 28.35 68.15 99.86 GAS5-230 retained intron transverse colon (Tissue)
ENST00000650796.1 ENST00000650796.1_1075_1108_+ 1075–1108 124.00 0.25 0.61 100.0 GAS5-230 retained intron transverse colon (Tissue)
ENST00000650796.1 ENST00000650796.1_1424_1452_+ 1424–1452 1119.00 2.27 5.46 100.0 GAS5-230 retained intron transverse colon (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1075_+ 1048–1075 1000.00 2.03 4.88 100.0 GAS5-230 retained intron transverse colon (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2673_+ 2631–2673 66.00 0.13 0.32 100.0 GAS5-230 retained intron transverse colon (Tissue)
ENST00000650796.1 ENST00000650796.1_1049_1079_+ 1049–1079 960.00 1.95 4.69 100.0 GAS5-230 retained intron transverse colon (Tissue)
ENST00000650796.1 ENST00000650796.1_160_197_+ 160–197 114.00 0.23 0.56 100.0 GAS5-230 retained intron transverse colon (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1086_+ 1048–1086 183.00 0.37 0.89 100.0 GAS5-230 retained intron transverse colon (Tissue)
ENST00000650796.1 ENST00000650796.1_2890_2925_+ 2890–2925 2646.00 5.37 12.92 85.38 GAS5-230 retained intron transverse colon (Tissue)
ENST00000650796.1 ENST00000650796.1_2898_2925_+ 2898–2925 3115.00 6.33 15.21 100.0 GAS5-230 retained intron transverse colon (Tissue)
ENST00000650796.1 ENST00000650796.1_363_440_+ 363–440 1022.00 2.08 4.99 100.0 GAS5-230 retained intron transverse colon (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2707_+ 2631–2707 170.00 0.35 0.83 89.95 GAS5-230 retained intron transverse colon (Tissue)
ENST00000650796.1 ENST00000650796.1_2172_2243_+ 2172–2243 1254.00 2.55 6.12 100.0 GAS5-230 retained intron transverse colon (Tissue)
ENST00000650796.1 ENST00000650796.1_400_440_+ 400–440 47.00 0.10 0.23 100.0 GAS5-230 retained intron transverse colon (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1452_+ 1391–1452 1519.00 3.09 7.42 100.0 GAS5-230 retained intron transverse colon (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2925_+ 2858–2925 11548.00 23.46 56.39 100.0 GAS5-230 retained intron transverse colon (Tissue)