ENCFF195CBI

Library Details

Organism: Homo Sapiens
Biosample: testis (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR626GVP
Description: Part of ENCODE experiment ENCSR626GVP. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's testis tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 862.97 3.34 4.30 34.41 RNA5SP202-201 rRNA pseudogene testis (Tissue)
ENST00000364315.1 ENST00000364315.1_87_119_+ 87–119 83.00 0.32 0.41 100.0 RNA5SP202-201 rRNA pseudogene testis (Tissue)
ENST00000364315.1 ENST00000364315.1_52_119_+ 52–119 119.00 0.46 0.59 100.0 RNA5SP202-201 rRNA pseudogene testis (Tissue)
ENST00000364315.1 ENST00000364315.1_37_95_+ 37–95 982.95 3.81 4.90 70.56 RNA5SP202-201 rRNA pseudogene testis (Tissue)
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 249.00 0.96 1.24 100.0 RNA5SP202-201 rRNA pseudogene testis (Tissue)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 879.92 3.41 4.38 49.35 RNA5SP202-201 rRNA pseudogene testis (Tissue)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 361.00 1.40 1.80 100.0 RNA5SP202-201 rRNA pseudogene testis (Tissue)
ENST00000364370.1 ENST00000364370.1_4_67_+ 4–67 13195.00 50.79 65.72 100.0 SNORD114-9-201 snoRNA testis (Tissue)
ENST00000364370.1 ENST00000364370.1_35_67_+ 35–67 10160.00 39.11 50.61 100.0 SNORD114-9-201 snoRNA testis (Tissue)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 143.00 6.20 0.71 100.0 Y_RNA.234-201 misc RNA testis (Tissue)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 120.00 8.66 0.60 100.0 RNA5SP141-201 rRNA pseudogene testis (Tissue)
ENST00000364687.1 ENST00000364687.1_34_67_+ 34–67 643.00 54.68 3.20 100.0 SNORD114-15-201 snoRNA testis (Tissue)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 250.00 18.46 1.25 100.0 ENST00000364722 snoRNA testis (Tissue)
ENST00000364830.3 ENST00000364830.3_3_67_+ 3–67 466.00 45.64 2.32 100.0 SNORD113-3-201 snoRNA testis (Tissue)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 3901.00 84.47 19.43 100.0 SNORD52-201 snoRNA testis (Tissue)
ENST00000364915.1 ENST00000364915.1_2_74_+ 2–74 12.00 1.14 0.06 100.0 SNORD117-201 snoRNA testis (Tissue)
ENST00000364969.1 ENST00000364969.1_38_71_+ 38–71 3230.00 14.59 16.09 100.0 SNORD114-3-201 snoRNA testis (Tissue)
ENST00000364969.1 ENST00000364969.1_3_71_+ 3–71 15984.00 72.19 79.62 100.0 SNORD114-3-201 snoRNA testis (Tissue)
ENST00000364969.1 ENST00000364969.1_4_62_+ 4–62 168.00 0.76 0.84 100.0 SNORD114-3-201 snoRNA testis (Tissue)
ENST00000364991.1 ENST00000364991.1_17_30_+ 17–30 3.00 1.53 0.01 100.0 RNA5SP298-201 rRNA pseudogene testis (Tissue)
ENST00000365080.1 ENST00000365080.1_3_67_+ 3–67 2350.00 76.10 11.71 100.0 SNORD113-9-201 snoRNA testis (Tissue)
ENST00000365161.1 ENST00000365161.1_1_38_+ 1–38 3485.00 10.55 17.36 100.0 SNORD38A-201 snoRNA testis (Tissue)
ENST00000365161.1 ENST00000365161.1_1_41_+ 1–41 383.00 1.16 1.91 100.0 SNORD38A-201 snoRNA testis (Tissue)
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 27367.00 82.81 136.31 100.0 SNORD38A-201 snoRNA testis (Tissue)
ENST00000365178.1 ENST00000365178.1_4_67_+ 4–67 47531.00 95.41 236.75 98.93 SNORD114-20-201 snoRNA testis (Tissue)