ENCFF195CBI

Library Details

Organism: Homo Sapiens
Biosample: testis (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR626GVP
Description: Part of ENCODE experiment ENCSR626GVP. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's testis tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362698.1 ENST00000362698.1_72_116_+ 72–116 2.00 0.01 0.01 100.0 RNU5A-1-201 snRNA testis (Tissue)
ENST00000362698.1 ENST00000362698.1_66_116_+ 66–116 538.81 3.34 2.68 58.89 RNU5A-1-201 snRNA testis (Tissue)
ENST00000362698.1 ENST00000362698.1_55_116_+ 55–116 1629.00 10.09 8.11 75.42 RNU5A-1-201 snRNA testis (Tissue)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 1495.00 9.26 7.45 57.66 RNU5A-1-201 snRNA testis (Tissue)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 1992.00 12.34 9.92 66.62 RNU5A-1-201 snRNA testis (Tissue)
ENST00000362723.1 ENST00000362723.1_3_71_+ 3–71 28262.00 95.02 140.77 100.0 SNORD114-14-201 snoRNA testis (Tissue)
ENST00000362883.1 ENST00000362883.1_35_70_+ 35–70 1556.00 4.20 7.75 100.0 SNORD104-201 snoRNA testis (Tissue)
ENST00000362883.1 ENST00000362883.1_10_70_+ 10–70 100.00 0.27 0.50 100.0 SNORD104-201 snoRNA testis (Tissue)
ENST00000362973.1 ENST00000362973.1_96_117_+ 96–117 9541.00 59.37 47.52 68.92 RNA5SP358-201 rRNA pseudogene testis (Tissue)
ENST00000363124.1 ENST00000363124.1_17_32_+ 17–32 2.00 0.12 0.01 40.0 RNA5SP145-201 rRNA pseudogene testis (Tissue)
ENST00000363194.1 ENST00000363194.1_1_32_+ 1–32 1.00 2.13 0.00 100.0 RNY4P9-201 misc RNA testis (Tissue)
ENST00000363286.1 ENST00000363286.1_63_116_+ 63–116 683.00 11.28 3.40 100.0 RNU5B-1-201 snRNA testis (Tissue)
ENST00000363286.1 ENST00000363286.1_55_116_+ 55–116 2062.00 34.05 10.27 100.0 RNU5B-1-201 snRNA testis (Tissue)
ENST00000363286.1 ENST00000363286.1_68_116_+ 68–116 8.00 0.13 0.04 100.0 RNU5B-1-201 snRNA testis (Tissue)
ENST00000363341.1 ENST00000363341.1_1_32_+ 1–32 7.00 5.74 0.03 100.0 RNY4P27-201 misc RNA testis (Tissue)
ENST00000363444.1 ENST00000363444.1_74_99_+ 74–99 146.00 21.16 0.73 100.0 Y_RNA.136-201 misc RNA testis (Tissue)
ENST00000363742.1 ENST00000363742.1_4_67_+ 4–67 23830.00 95.30 118.70 99.12 SNORD114-25-201 snoRNA testis (Tissue)
ENST00000363762.1 ENST00000363762.1_3_72_+ 3–72 7727.00 94.50 38.49 100.0 SNORD113-7-201 snoRNA testis (Tissue)
ENST00000363872.1 ENST00000363872.1_74_98_+ 74–98 47.00 30.52 0.23 100.0 Y_RNA.181-201 misc RNA testis (Tissue)
ENST00000364228.1 ENST00000364228.1_1_32_+ 1–32 247.94 24.55 1.23 73.79 RNY1-201 misc RNA testis (Tissue)
ENST00000364228.1 ENST00000364228.1_1_39_+ 1–39 199.00 19.70 0.99 100.0 RNY1-201 misc RNA testis (Tissue)
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 62.19 6.16 0.31 29.47 RNY1-201 misc RNA testis (Tissue)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 24.00 2.38 0.12 100.0 RNY1-201 misc RNA testis (Tissue)
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 1148.00 4.45 5.72 100.0 RNA5SP202-201 rRNA pseudogene testis (Tissue)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 862.97 3.34 4.30 34.41 RNA5SP202-201 rRNA pseudogene testis (Tissue)