ENCFF195CBI

Library Details

Organism: Homo Sapiens
Biosample: testis (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR626GVP
Description: Part of ENCODE experiment ENCSR626GVP. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's testis tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365328.1 ENST00000365328.1_282_331_+ 282–331 77.00 2.29 0.38 100.0 7SK.1-201 misc RNA testis (Tissue)
ENST00000365328.1 ENST00000365328.1_273_331_+ 273–331 425.00 12.62 2.12 77.55 7SK.1-201 misc RNA testis (Tissue)
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 552.00 16.38 2.75 81.78 7SK.1-201 misc RNA testis (Tissue)
ENST00000365328.1 ENST00000365328.1_270_331_+ 270–331 587.00 17.42 2.92 61.72 7SK.1-201 misc RNA testis (Tissue)
ENST00000365394.1 ENST00000365394.1_85_96_+ 85–96 84.00 46.15 0.42 100.0 RNA5SP77-201 rRNA pseudogene testis (Tissue)
ENST00000365423.1 ENST00000365423.1_4_67_+ 4–67 52046.00 54.47 259.24 98.74 SNORD114-22-201 snoRNA testis (Tissue)
ENST00000365423.1 ENST00000365423.1_35_67_+ 35–67 41359.00 43.29 206.01 100.0 SNORD114-22-201 snoRNA testis (Tissue)
ENST00000365444.1 ENST00000365444.1_3_69_+ 3–69 6860.00 84.55 34.17 100.0 SNORD6-201 snoRNA testis (Tissue)
ENST00000365444.1 ENST00000365444.1_30_69_+ 30–69 185.00 2.28 0.92 100.0 SNORD6-201 snoRNA testis (Tissue)
ENST00000365530.1 ENST00000365530.1_4_67_+ 4–67 10800.00 41.06 53.79 98.96 SNORD82-201 snoRNA testis (Tissue)
ENST00000365530.1 ENST00000365530.1_3_48_+ 3–48 2265.24 8.61 11.28 30.29 SNORD82-201 snoRNA testis (Tissue)
ENST00000365530.1 ENST00000365530.1_37_67_+ 37–67 213.00 0.81 1.06 100.0 SNORD82-201 snoRNA testis (Tissue)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 5230.98 19.89 26.06 69.95 SNORD82-201 snoRNA testis (Tissue)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 2024.00 7.70 10.08 100.0 SNORD82-201 snoRNA testis (Tissue)
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 356.00 1.35 1.77 100.0 SNORD82-201 snoRNA testis (Tissue)
ENST00000365530.1 ENST00000365530.1_30_67_+ 30–67 2130.00 8.10 10.61 91.61 SNORD82-201 snoRNA testis (Tissue)
ENST00000365699.4 ENST00000365699.4_9_32_+ 9–32 6092.00 96.38 30.34 98.16 MIR146B-201 miRNA testis (Tissue)
ENST00000366365.3 ENST00000366365.3_327_364_+ 327–364 681.00 67.63 3.39 100.0 SNHG20-201 lncRNA testis (Tissue)
ENST00000369825.6 ENST00000369825.6_444_466_+ 444–466 37.00 26.43 0.18 100.0 ATP5MK-205 protein coding testis (Tissue)
ENST00000377186.4 ENST00000377186.4_697_717_+ 697–717 1.00 2.00 0.00 100.0 LINC01556-201 lncRNA testis (Tissue)
ENST00000378755.9 ENST00000378755.9_1289_1300_+ 1289–1300 28.00 33.33 0.14 100.0 ATAD3A-202 protein coding testis (Tissue)
ENST00000381414.8 ENST00000381414.8_4377_4392_+ 4377–4392 15.00 10.20 0.07 24.19 TMC5-202 protein coding testis (Tissue)
ENST00000382874.6 ENST00000382874.6_779_809_+ 779–809 39.00 41.05 0.19 100.0 ZMYM2-203 protein coding testis (Tissue)
ENST00000383858.1 ENST00000383858.1_151_164_+ 151–164 106.00 3.26 0.53 100.0 RNVU1-7-201 snRNA testis (Tissue)
ENST00000383924.1 ENST00000383924.1_85_107_+ 85–107 39.00 37.14 0.19 100.0 Y_RNA.389-201 misc RNA testis (Tissue)