ENCFF195CBI

Library Details

Organism: Homo Sapiens
Biosample: testis (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR626GVP
Description: Part of ENCODE experiment ENCSR626GVP. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's testis tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362283.1 ENST00000362283.1_6_29_+ 6–29 2237.00 67.32 11.14 95.93 MIR30D-201 miRNA testis (Tissue)
ENST00000362283.1 ENST00000362283.1_6_25_+ 6–25 603.00 18.15 3.00 86.39 MIR30D-201 miRNA testis (Tissue)
ENST00000362291.1 ENST00000362291.1_15_35_+ 15–35 846.00 72.43 4.21 100.0 MIR126-201 miRNA testis (Tissue)
ENST00000362291.1 ENST00000362291.1_52_73_+ 52–73 267.00 22.86 1.33 92.39 MIR126-201 miRNA testis (Tissue)
ENST00000362298.3 ENST00000362298.3_42_63_+ 42–63 7.00 36.84 0.03 100.0 MIR374A-201 miRNA testis (Tissue)
ENST00000362307.1 ENST00000362307.1_8_29_+ 8–29 27.00 87.10 0.13 100.0 MIR31-201 miRNA testis (Tissue)
ENST00000362400.1 ENST00000362400.1_32_95_+ 32–95 699.00 2.53 3.48 67.34 RNA5S12-201 rRNA testis (Tissue)
ENST00000362400.1 ENST00000362400.1_1_45_+ 1–45 39.00 0.14 0.19 100.0 RNA5S12-201 rRNA testis (Tissue)
ENST00000362400.1 ENST00000362400.1_1_49_+ 1–49 249.00 0.90 1.24 83.28 RNA5S12-201 rRNA testis (Tissue)
ENST00000362400.1 ENST00000362400.1_1_58_+ 1–58 44.00 0.16 0.22 100.0 RNA5S12-201 rRNA testis (Tissue)
ENST00000362400.1 ENST00000362400.1_26_95_+ 26–95 145.00 0.53 0.72 100.0 RNA5S12-201 rRNA testis (Tissue)
ENST00000362400.1 ENST00000362400.1_56_95_+ 56–95 250.73 0.91 1.25 53.46 RNA5S12-201 rRNA testis (Tissue)
ENST00000362400.1 ENST00000362400.1_79_95_+ 79–95 247.00 0.89 1.23 36.87 RNA5S12-201 rRNA testis (Tissue)
ENST00000362400.1 ENST00000362400.1_1_32_+ 1–32 98.00 0.36 0.49 77.78 RNA5S12-201 rRNA testis (Tissue)
ENST00000362400.1 ENST00000362400.1_14_32_+ 14–32 17.00 0.06 0.08 100.0 RNA5S12-201 rRNA testis (Tissue)
ENST00000362400.1 ENST00000362400.1_83_95_+ 83–95 1334.00 4.83 6.64 75.92 RNA5S12-201 rRNA testis (Tissue)
ENST00000362400.1 ENST00000362400.1_58_95_+ 58–95 168.40 0.61 0.84 47.57 RNA5S12-201 rRNA testis (Tissue)
ENST00000362415.1 ENST00000362415.1_74_100_+ 74–100 14.00 12.07 0.07 100.0 Y_RNA.14-201 misc RNA testis (Tissue)
ENST00000362607.1 ENST00000362607.1_1_25_+ 1–25 266.00 8.95 1.32 100.0 SNORA31-201 snoRNA testis (Tissue)
ENST00000362610.1 ENST00000362610.1_1_53_+ 1–53 17.00 0.98 0.08 25.37 RNA5SP389-201 rRNA pseudogene testis (Tissue)
ENST00000362610.1 ENST00000362610.1_1_42_+ 1–42 125.00 7.21 0.62 71.43 RNA5SP389-201 rRNA pseudogene testis (Tissue)
ENST00000362610.1 ENST00000362610.1_1_70_+ 1–70 115.00 6.64 0.57 100.0 RNA5SP389-201 rRNA pseudogene testis (Tissue)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 1992.00 12.34 9.92 66.62 RNU5A-1-201 snRNA testis (Tissue)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 416.93 2.58 2.08 62.32 RNU5A-1-201 snRNA testis (Tissue)
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 2605.00 16.14 12.98 66.5 RNU5A-1-201 snRNA testis (Tissue)