ENCFF195CBI

Library Details

Organism: Homo Sapiens
Biosample: testis (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR626GVP
Description: Part of ENCODE experiment ENCSR626GVP. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's testis tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000823279.1 ENST00000823279.1_126_169_+ 126–169 3.00 0.05 0.01 100.0 ENST00000823279 lncRNA testis (Tissue)
ENST00000823279.1 ENST00000823279.1_109_169_+ 109–169 151.70 2.74 0.76 44.1 ENST00000823279 lncRNA testis (Tissue)
ENST00000823279.1 ENST00000823279.1_103_169_+ 103–169 160.22 2.89 0.80 50.38 ENST00000823279 lncRNA testis (Tissue)
ENST00000823279.1 ENST00000823279.1_107_169_+ 107–169 324.06 5.85 1.61 54.83 ENST00000823279 lncRNA testis (Tissue)
ENST00000823279.1 ENST00000823279.1_105_169_+ 105–169 201.55 3.64 1.00 33.65 ENST00000823279 lncRNA testis (Tissue)
ENST00000823279.1 ENST00000823279.1_131_169_+ 131–169 63.00 1.14 0.31 80.77 ENST00000823279 lncRNA testis (Tissue)
ENST00000823279.1 ENST00000823279.1_151_169_+ 151–169 207.38 3.75 1.03 25.95 ENST00000823279 lncRNA testis (Tissue)
ENST00000823801.1 ENST00000823801.1_153_169_+ 153–169 823.72 14.89 4.10 78.3 ENST00000823801 lncRNA testis (Tissue)
ENST00000827714.1 ENST00000827714.1_110_129_+ 110–129 119.00 60.41 0.59 72.12 ENST00000827714 lncRNA testis (Tissue)
ENST00000827714.1 ENST00000827714.1_110_131_+ 110–131 46.00 23.35 0.23 27.88 ENST00000827714 lncRNA testis (Tissue)
ENST00000828033.1 ENST00000828033.1_252_322_+ 252–322 133.00 1.13 0.66 100.0 GAS5-377 lncRNA testis (Tissue)
ENST00000828033.1 ENST00000828033.1_278_318_+ 278–318 18.00 0.15 0.09 100.0 GAS5-377 lncRNA testis (Tissue)
ENST00000828033.1 ENST00000828033.1_290_318_+ 290–318 813.00 6.93 4.05 100.0 GAS5-377 lncRNA testis (Tissue)
ENST00000828033.1 ENST00000828033.1_252_318_+ 252–318 10464.00 89.23 52.12 100.0 GAS5-377 lncRNA testis (Tissue)
ENST00000830954.1 ENST00000830954.1_968_989_+ 968–989 15.00 83.33 0.07 100.0 MIR205HG-245 lncRNA testis (Tissue)
ENST00000836993.1 ENST00000836993.1_422_463_+ 422–463 65.00 1.87 0.32 100.0 ZFAS1-238 lncRNA testis (Tissue)
ENST00000836993.1 ENST00000836993.1_402_463_+ 402–463 31.00 0.89 0.15 100.0 ZFAS1-238 lncRNA testis (Tissue)
ENST00000836993.1 ENST00000836993.1_410_463_+ 410–463 1197.00 34.39 5.96 100.0 ZFAS1-238 lncRNA testis (Tissue)
ENST00000836997.1 ENST00000836997.1_305_352_+ 305–352 8243.00 94.24 41.06 100.0 ZFAS1-242 lncRNA testis (Tissue)
ENST00000837997.1 ENST00000837997.1_211_224_+ 211–224 465.00 57.62 2.32 100.0 ENST00000837997 lncRNA testis (Tissue)
ENST00000837997.1 ENST00000837997.1_214_225_+ 214–225 97.00 12.02 0.48 100.0 ENST00000837997 lncRNA testis (Tissue)
ENST00000839036.1 ENST00000839036.1_40_61_+ 40–61 1931.00 76.17 9.62 83.27 ENST00000839036 lncRNA testis (Tissue)
ENST00000849527.1 ENST00000849527.1_293_307_+ 293–307 4.00 5.88 0.02 100.0 ENST00000849527 lncRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_3_32_+ 3–32 94763.00 95.03 472.01 98.26 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_2_52_+ 2–52 47.00 0.05 0.23 100.0 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA testis (Tissue)