ENCFF195CBI

Library Details

Organism: Homo Sapiens
Biosample: testis (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR626GVP
Description: Part of ENCODE experiment ENCSR626GVP. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's testis tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000771298.1 ENST00000771298.1_485_522_+ 485–522 206.00 1.75 1.03 100.0 ENST00000771298 lncRNA testis (Tissue)
ENST00000772672.1 ENST00000772672.1_91_113_+ 91–113 23.00 2.17 0.11 100.0 ENST00000772672 lncRNA testis (Tissue)
ENST00000773843.1 ENST00000773843.1_422_435_+ 422–435 98.00 16.01 0.49 100.0 ENST00000773843 lncRNA testis (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1392_+ 1328–1392 158828.00 40.44 791.11 89.7 SNHG12-223 lncRNA testis (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1395_+ 1328–1395 233026.00 59.33 1160.69 99.13 SNHG12-223 lncRNA testis (Tissue)
ENST00000776279.1 ENST00000776279.1_205_232_+ 205–232 32800.00 68.21 163.37 100.0 SNHG25-206 lncRNA testis (Tissue)
ENST00000776279.1 ENST00000776279.1_161_234_+ 161–234 205.00 0.43 1.02 56.16 SNHG25-206 lncRNA testis (Tissue)
ENST00000776279.1 ENST00000776279.1_161_206_+ 161–206 483.00 1.00 2.41 100.0 SNHG25-206 lncRNA testis (Tissue)
ENST00000776279.1 ENST00000776279.1_176_234_+ 176–234 391.09 0.81 1.95 44.54 SNHG25-206 lncRNA testis (Tissue)
ENST00000776279.1 ENST00000776279.1_172_234_+ 172–234 360.24 0.75 1.79 41.79 SNHG25-206 lncRNA testis (Tissue)
ENST00000776279.1 ENST00000776279.1_174_234_+ 174–234 547.34 1.14 2.73 39.12 SNHG25-206 lncRNA testis (Tissue)
ENST00000776279.1 ENST00000776279.1_196_234_+ 196–234 5301.00 11.02 26.40 77.31 SNHG25-206 lncRNA testis (Tissue)
ENST00000776279.1 ENST00000776279.1_184_234_+ 184–234 161.00 0.33 0.80 100.0 SNHG25-206 lncRNA testis (Tissue)
ENST00000779378.1 ENST00000779378.1_905_928_+ 905–928 104.00 83.20 0.52 88.89 MIR155HG-205 lncRNA testis (Tissue)
ENST00000786284.1 ENST00000786284.1_38_80_+ 38–80 35.00 5.89 0.17 92.11 ENST00000786284 lncRNA testis (Tissue)
ENST00000786284.1 ENST00000786284.1_46_80_+ 46–80 216.00 36.36 1.08 100.0 ENST00000786284 lncRNA testis (Tissue)
ENST00000786284.1 ENST00000786284.1_40_80_+ 40–80 3.00 0.51 0.01 9.09 ENST00000786284 lncRNA testis (Tissue)
ENST00000797550.1 ENST00000797550.1_7_63_+ 7–63 1309.51 20.39 6.52 40.45 ENST00000797550 lncRNA testis (Tissue)
ENST00000797550.1 ENST00000797550.1_9_63_+ 9–63 1485.41 23.13 7.40 45.89 ENST00000797550 lncRNA testis (Tissue)
ENST00000797550.1 ENST00000797550.1_9_52_+ 9–52 1389.00 21.63 6.92 65.43 ENST00000797550 lncRNA testis (Tissue)
ENST00000806893.1 ENST00000806893.1_425_447_+ 425–447 30848.00 84.00 153.65 91.93 MIR181A1HG-212 lncRNA testis (Tissue)
ENST00000806893.1 ENST00000806893.1_465_486_+ 465–486 78.00 0.21 0.39 100.0 MIR181A1HG-212 lncRNA testis (Tissue)
ENST00000812667.1 ENST00000812667.1_308_348_+ 308–348 81.00 49.39 0.40 100.0 C19orf48P-218 lncRNA testis (Tissue)
ENST00000815283.1 ENST00000815283.1_298_361_+ 298–361 1749.00 68.97 8.71 92.05 SNHG18-220 lncRNA testis (Tissue)
ENST00000817026.1 ENST00000817026.1_659_679_+ 659–679 65.00 5.41 0.32 100.0 ENST00000817026 lncRNA testis (Tissue)