ENCFF195CBI

Library Details

Organism: Homo Sapiens
Biosample: testis (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR626GVP
Description: Part of ENCODE experiment ENCSR626GVP. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's testis tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-121020729 tRNA-transcript-chr1-121020729_1_54_+ 1–54 18.00 0.00 0.09 100.0 TRNA-TRANSCRIPT-CHR1-121020729 Val tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_23_+ 1–23 1300.00 41.57 6.48 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_33_+ 1–33 1387.00 44.36 6.91 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 11.00 3.70 0.05 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 17.00 0.84 0.08 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 1996.00 48.41 9.94 68.99 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 182.00 0.02 0.91 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-159141611 tRNA-transcript-chr1-159141611_3_20_+ 3–20 38.00 53.52 0.19 100.0 TRNA-TRANSCRIPT-CHR1-159141611 Arg tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 1287.00 24.04 6.41 91.41 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_32_53_+ 32–53 3.00 0.06 0.01 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 472.00 8.82 2.35 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 521.00 40.61 2.60 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 139.00 0.03 0.69 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 30.00 0.01 0.15 66.67 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 16.00 0.00 0.08 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 11.00 0.00 0.05 91.67 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 141493.00 30.10 704.77 53.45 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 2.00 0.00 0.01 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 294.00 68.69 1.46 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 144.00 0.03 0.72 100.0 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 754.00 38.00 3.76 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 318.00 16.03 1.58 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 931.00 36.96 4.64 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 244.00 0.06 1.22 15.07 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 1750.00 32.86 8.72 50.87 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA testis (Tissue)