ENCFF195CBI
Library Details
| Organism: | Homo Sapiens |
|---|---|
| Biosample: | testis (Tissue) |
| GEO DB ID: | Not available |
| ENCODE Experiment ID: | ENCSR626GVP |
| Description: | Part of ENCODE experiment ENCSR626GVP. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's testis tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size. |
|---|---|
| Author: | Thomas Gingeras, CSHL |
sncRNAs in this Library
| Precursor Transcript ID | sncRNA Name | sncRNA position in precursor | Expression | Expression Fraction | Expression (CPM) | Prominence | Transcript Name | Transcript Type | Biosample |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000387409.1 | ENST00000387409.1_1_32_+ | 1–32 | 10300.00 | 18.05 | 51.30 | 72.0 | MT-TY-201 | Mt tRNA | testis (Tissue) |
| ENST00000387409.1 | ENST00000387409.1_1_56_+ | 1–56 | 248.00 | 0.43 | 1.24 | 100.0 | MT-TY-201 | Mt tRNA | testis (Tissue) |
| ENST00000387409.1 | ENST00000387409.1_1_37_+ | 1–37 | 12764.00 | 22.37 | 63.58 | 92.12 | MT-TY-201 | Mt tRNA | testis (Tissue) |
| ENST00000387409.1 | ENST00000387409.1_1_50_+ | 1–50 | 191.00 | 0.33 | 0.95 | 100.0 | MT-TY-201 | Mt tRNA | testis (Tissue) |
| ENST00000387409.1 | ENST00000387409.1_1_28_+ | 1–28 | 694.00 | 1.22 | 3.46 | 100.0 | MT-TY-201 | Mt tRNA | testis (Tissue) |
| ENST00000387409.1 | ENST00000387409.1_1_65_+ | 1–65 | 24821.00 | 43.49 | 123.63 | 100.0 | MT-TY-201 | Mt tRNA | testis (Tissue) |
| ENST00000387419.1 | ENST00000387419.1_1_51_+ | 1–51 | 245.00 | 64.14 | 1.22 | 100.0 | MT-TD-201 | Mt tRNA | testis (Tissue) |
| ENST00000387421.1 | ENST00000387421.1_1_31_+ | 1–31 | 71.00 | 0.22 | 0.35 | 100.0 | MT-TK-201 | Mt tRNA | testis (Tissue) |
| ENST00000387421.1 | ENST00000387421.1_1_58_+ | 1–58 | 5625.00 | 17.17 | 28.02 | 100.0 | MT-TK-201 | Mt tRNA | testis (Tissue) |
| ENST00000387421.1 | ENST00000387421.1_1_28_+ | 1–28 | 51.00 | 0.16 | 0.25 | 100.0 | MT-TK-201 | Mt tRNA | testis (Tissue) |
| ENST00000387421.1 | ENST00000387421.1_1_52_+ | 1–52 | 24395.00 | 74.47 | 121.51 | 100.0 | MT-TK-201 | Mt tRNA | testis (Tissue) |
| ENST00000387449.1 | ENST00000387449.1_1_53_+ | 1–53 | 428.00 | 14.07 | 2.13 | 100.0 | MT-TS2-201 | Mt tRNA | testis (Tissue) |
| ENST00000387449.1 | ENST00000387449.1_1_20_+ | 1–20 | 193.00 | 6.34 | 0.96 | 91.47 | MT-TS2-201 | Mt tRNA | testis (Tissue) |
| ENST00000387449.1 | ENST00000387449.1_1_26_+ | 1–26 | 89.00 | 2.92 | 0.44 | 100.0 | MT-TS2-201 | Mt tRNA | testis (Tissue) |
| ENST00000387456.1 | ENST00000387456.1_1_31_+ | 1–31 | 109.00 | 22.71 | 0.54 | 100.0 | MT-TL2-201 | Mt tRNA | testis (Tissue) |
| ENST00000387459.1 | ENST00000387459.1_24_69_+ | 24–69 | 97.00 | 0.01 | 0.48 | 100.0 | MT-TE-201 | Mt tRNA | testis (Tissue) |
| ENST00000387459.1 | ENST00000387459.1_13_67_+ | 13–67 | 299.00 | 0.04 | 1.49 | 100.0 | MT-TE-201 | Mt tRNA | testis (Tissue) |
| ENST00000387459.1 | ENST00000387459.1_1_62_+ | 1–62 | 1168.00 | 0.16 | 5.82 | 71.88 | MT-TE-201 | Mt tRNA | testis (Tissue) |
| ENST00000387459.1 | ENST00000387459.1_40_67_+ | 40–67 | 211.00 | 0.03 | 1.05 | 56.12 | MT-TE-201 | Mt tRNA | testis (Tissue) |
| ENST00000387459.1 | ENST00000387459.1_1_69_+ | 1–69 | 608473.00 | 84.26 | 3030.76 | 88.68 | MT-TE-201 | Mt tRNA | testis (Tissue) |
| ENST00000387459.1 | ENST00000387459.1_1_57_+ | 1–57 | 559.00 | 0.08 | 2.78 | 100.0 | MT-TE-201 | Mt tRNA | testis (Tissue) |
| ENST00000387459.1 | ENST00000387459.1_39_69_+ | 39–69 | 165.00 | 0.02 | 0.82 | 50.93 | MT-TE-201 | Mt tRNA | testis (Tissue) |
| ENST00000388006.1 | ENST00000388006.1_7_28_+ | 7–28 | 127.00 | 44.88 | 0.63 | 100.0 | MIR196A1-201 | miRNA | testis (Tissue) |
| ENST00000389680.2 | ENST00000389680.2_316_354_+ | 316–354 | 2580.00 | 58.40 | 12.85 | 100.0 | MT-RNR1-201 | Mt rRNA | testis (Tissue) |
| ENST00000390180.1 | ENST00000390180.1_64_86_+ | 64–86 | 10.00 | 66.67 | 0.05 | 100.0 | MIR454-201 | miRNA | testis (Tissue) |