ENCFF195CBI

Library Details

Organism: Homo Sapiens
Biosample: testis (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR626GVP
Description: Part of ENCODE experiment ENCSR626GVP. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's testis tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 101.00 47.42 0.50 100.0 MIR501-201 miRNA testis (Tissue)
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 230.00 84.87 1.15 100.0 MIR769-201 miRNA testis (Tissue)
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 30.00 56.60 0.15 100.0 KRTAP19-1-201 protein coding testis (Tissue)
ENST00000390708.1 ENST00000390708.1_11_33_+ 11–33 6.00 28.57 0.03 100.0 MIR708-201 miRNA testis (Tissue)
ENST00000390725.1 ENST00000390725.1_44_66_+ 44–66 49123.00 75.11 244.68 100.0 MIR509-3-201 miRNA testis (Tissue)
ENST00000390751.3 ENST00000390751.3_47_68_+ 47–68 2.00 100.00 0.01 100.0 MIR543-201 miRNA testis (Tissue)
ENST00000390813.1 ENST00000390813.1_45_67_+ 45–67 3.00 100.00 0.01 100.0 MIR301B-201 miRNA testis (Tissue)
ENST00000390851.1 ENST00000390851.1_150_165_+ 150–165 321.00 40.48 1.60 75.18 RNU1-82P-201 snRNA testis (Tissue)
ENST00000390856.1 ENST00000390856.1_48_74_+ 48–74 2089.00 28.71 10.41 66.98 SNORD66-201 snoRNA testis (Tissue)
ENST00000390856.1 ENST00000390856.1_25_76_+ 25–76 1278.00 17.57 6.37 100.0 SNORD66-201 snoRNA testis (Tissue)
ENST00000390856.1 ENST00000390856.1_1_59_+ 1–59 136.00 1.87 0.68 100.0 SNORD66-201 snoRNA testis (Tissue)
ENST00000390880.2 ENST00000390880.2_45_67_+ 45–67 11.00 36.67 0.05 100.0 U3.17-201 snoRNA testis (Tissue)
ENST00000390930.1 ENST00000390930.1_207_235_+ 207–235 838.00 74.89 4.17 100.0 SNORD17-201 snoRNA testis (Tissue)
ENST00000390994.1 ENST00000390994.1_6_74_+ 6–74 132.00 65.02 0.66 100.0 SNORD72-201 snoRNA testis (Tissue)
ENST00000391007.1 ENST00000391007.1_9_77_+ 9–77 1223.00 67.12 6.09 100.0 SNORD70B-201 snoRNA testis (Tissue)
ENST00000391107.1 ENST00000391107.1_62_87_+ 62–87 1733.00 87.22 8.63 96.6 RNY4P18-201 misc RNA testis (Tissue)
ENST00000391150.1 ENST00000391150.1_9_48_+ 9–48 5962.00 15.95 29.70 100.0 SNORD69-201 snoRNA testis (Tissue)
ENST00000391150.1 ENST00000391150.1_9_69_+ 9–69 25132.00 67.22 125.18 100.0 SNORD69-201 snoRNA testis (Tissue)
ENST00000391150.1 ENST00000391150.1_35_69_+ 35–69 2455.00 6.57 12.23 100.0 SNORD69-201 snoRNA testis (Tissue)
ENST00000391150.1 ENST00000391150.1_9_35_+ 9–35 379.00 1.01 1.89 100.0 SNORD69-201 snoRNA testis (Tissue)
ENST00000393354.7 ENST00000393354.7_7988_8016_+ 7988–8016 10.00 0.10 0.05 100.0 B4GALNT2-202 protein coding testis (Tissue)
ENST00000393354.7 ENST00000393354.7_8003_8016_+ 8003–8016 8184.00 84.63 40.76 93.3 B4GALNT2-202 protein coding testis (Tissue)
ENST00000396355.5 ENST00000396355.5_35_56_+ 35–56 41.00 35.04 0.20 100.0 NDE1-202 protein coding testis (Tissue)
ENST00000401182.3 ENST00000401182.3_11_31_+ 11–31 13.00 68.42 0.06 100.0 MIR450B-201 miRNA testis (Tissue)
ENST00000401258.3 ENST00000401258.3_48_71_+ 48–71 9.00 23.08 0.04 100.0 MIR887-201 miRNA testis (Tissue)