ENCFF195CBI

Library Details

Organism: Homo Sapiens
Biosample: testis (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR626GVP
Description: Part of ENCODE experiment ENCSR626GVP. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's testis tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 72970.00 97.46 363.46 98.15 MIRLET7F2-201 miRNA testis (Tissue)
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 14.00 66.67 0.07 100.0 MIR652-201 miRNA testis (Tissue)
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 902.00 68.28 4.49 100.0 MIR140-201 miRNA testis (Tissue)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 23.00 30.67 0.11 50.0 MIR106B-201 miRNA testis (Tissue)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 4829.00 40.50 24.05 100.0 SNORD41-201 snoRNA testis (Tissue)
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 303.00 23.88 1.51 100.0 MT-TF-201 Mt tRNA testis (Tissue)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 176.00 13.87 0.88 61.11 MT-TF-201 Mt tRNA testis (Tissue)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 14.00 1.10 0.07 31.11 MT-TF-201 Mt tRNA testis (Tissue)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 698.00 33.45 3.48 100.0 MT-TV-201 Mt tRNA testis (Tissue)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 41.00 0.28 0.20 100.0 MT-RNR2-201 Mt rRNA testis (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 1508.00 10.45 7.51 75.4 MT-RNR2-201 Mt rRNA testis (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 1130.00 7.83 5.63 100.0 MT-RNR2-201 Mt rRNA testis (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1531_+ 1500–1531 3362.00 23.30 16.75 93.52 MT-RNR2-201 Mt rRNA testis (Tissue)
ENST00000387347.2 ENST00000387347.2_74_96_+ 74–96 45.00 0.31 0.22 100.0 MT-RNR2-201 Mt rRNA testis (Tissue)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 34.00 0.24 0.17 100.0 MT-RNR2-201 Mt rRNA testis (Tissue)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 2.00 0.01 0.01 100.0 MT-RNR2-201 Mt rRNA testis (Tissue)
ENST00000387365.1 ENST00000387365.1_1_51_+ 1–51 485.00 45.84 2.42 94.91 MT-TI-201 Mt tRNA testis (Tissue)
ENST00000387365.1 ENST00000387365.1_1_58_+ 1–58 92.00 8.70 0.46 100.0 MT-TI-201 Mt tRNA testis (Tissue)
ENST00000387372.1 ENST00000387372.1_1_32_+ 1–32 16650.61 32.68 82.94 81.56 MT-TQ-201 Mt tRNA testis (Tissue)
ENST00000387372.1 ENST00000387372.1_1_55_+ 1–55 76.00 0.15 0.38 100.0 MT-TQ-201 Mt tRNA testis (Tissue)
ENST00000387372.1 ENST00000387372.1_1_36_+ 1–36 13666.00 26.82 68.07 86.55 MT-TQ-201 Mt tRNA testis (Tissue)
ENST00000387372.1 ENST00000387372.1_1_30_+ 1–30 2120.66 4.16 10.56 43.7 MT-TQ-201 Mt tRNA testis (Tissue)
ENST00000387377.1 ENST00000387377.1_1_51_+ 1–51 845.00 31.58 4.21 100.0 MT-TM-201 Mt tRNA testis (Tissue)
ENST00000387377.1 ENST00000387377.1_1_31_+ 1–31 710.00 26.53 3.54 59.07 MT-TM-201 Mt tRNA testis (Tissue)
ENST00000387405.1 ENST00000387405.1_1_24_+ 1–24 123.00 6.96 0.61 100.0 MT-TC-201 Mt tRNA testis (Tissue)