ENCFF195CBI

Library Details

Organism: Homo Sapiens
Biosample: testis (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR626GVP
Description: Part of ENCODE experiment ENCSR626GVP. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's testis tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385051.1 ENST00000385051.1_51_71_+ 51–71 15.00 5.14 0.07 100.0 MIR500A-201 miRNA testis (Tissue)
ENST00000385051.1 ENST00000385051.1_52_74_+ 52–74 199.00 68.15 0.99 100.0 MIR500A-201 miRNA testis (Tissue)
ENST00000385092.1 ENST00000385092.1_6_21_+ 6–21 125.00 1.24 0.62 100.0 MIR30A-201 miRNA testis (Tissue)
ENST00000385092.1 ENST00000385092.1_6_25_+ 6–25 1155.00 11.44 5.75 85.11 MIR30A-201 miRNA testis (Tissue)
ENST00000385092.1 ENST00000385092.1_6_29_+ 6–29 7882.00 78.08 39.26 97.5 MIR30A-201 miRNA testis (Tissue)
ENST00000385092.1 ENST00000385092.1_47_68_+ 47–68 615.00 6.09 3.06 100.0 MIR30A-201 miRNA testis (Tissue)
ENST00000385129.3 ENST00000385129.3_19_40_+ 19–40 108.00 1.76 0.54 100.0 MIR27B-201 miRNA testis (Tissue)
ENST00000385129.3 ENST00000385129.3_61_80_+ 61–80 5402.00 87.98 26.91 93.75 MIR27B-201 miRNA testis (Tissue)
ENST00000385189.3 ENST00000385189.3_25_47_+ 25–47 466.00 89.27 2.32 100.0 MIR196A2-201 miRNA testis (Tissue)
ENST00000385196.1 ENST00000385196.1_15_36_+ 15–36 2.00 100.00 0.01 100.0 MIR577-201 miRNA testis (Tissue)
ENST00000385199.1 ENST00000385199.1_51_70_+ 51–70 188.00 80.34 0.94 90.38 MIR654-201 miRNA testis (Tissue)
ENST00000385200.3 ENST00000385200.3_33_54_+ 33–54 7432.00 95.66 37.02 97.2 MIR204-201 miRNA testis (Tissue)
ENST00000385212.3 ENST00000385212.3_54_76_+ 54–76 338.00 89.89 1.68 100.0 MIR152-201 miRNA testis (Tissue)
ENST00000385227.1 ENST00000385227.1_17_40_+ 17–40 526.00 88.40 2.62 100.0 MIR30C1-201 miRNA testis (Tissue)
ENST00000385235.3 ENST00000385235.3_16_37_+ 16–37 24.00 64.86 0.12 100.0 MIR660-201 miRNA testis (Tissue)
ENST00000385236.1 ENST00000385236.1_15_37_+ 15–37 4249.00 68.94 21.16 85.53 MIR125B1-201 miRNA testis (Tissue)
ENST00000385236.1 ENST00000385236.1_55_76_+ 55–76 502.00 8.15 2.50 100.0 MIR125B1-201 miRNA testis (Tissue)
ENST00000385254.3 ENST00000385254.3_57_78_+ 57–78 18.00 23.38 0.09 100.0 MIR493-201 miRNA testis (Tissue)
ENST00000385254.3 ENST00000385254.3_16_37_+ 16–37 41.00 53.25 0.20 100.0 MIR493-201 miRNA testis (Tissue)
ENST00000385255.3 ENST00000385255.3_23_44_+ 23–44 525.15 17.45 2.62 25.48 MIR182-201 miRNA testis (Tissue)
ENST00000385255.3 ENST00000385255.3_23_46_+ 23–46 1646.73 54.73 8.20 68.93 MIR182-201 miRNA testis (Tissue)
ENST00000385259.1 ENST00000385259.1_13_34_+ 13–34 3529.00 88.69 17.58 92.17 MIR100-201 miRNA testis (Tissue)
ENST00000385261.1 ENST00000385261.1_51_73_+ 51–73 33.00 86.84 0.16 100.0 MIR301A-201 miRNA testis (Tissue)
ENST00000385274.1 ENST00000385274.1_55_74_+ 55–74 1410.00 92.22 7.02 96.71 MIR130A-201 miRNA testis (Tissue)
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 107.00 7.00 0.53 48.42 MIR130A-201 miRNA testis (Tissue)