ENCFF193XIP

Library Details

Organism: Homo Sapiens
Biosample: neural progenitor cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR828LSC
Description: Part of ENCODE experiment ENCSR828LSC. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a neuronal pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384027.1 ENST00000384027.1_2_73_+ 2–73 13456.00 12.16 11.10 82.79 SNORD101-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384048.1 ENST00000384048.1_1_66_+ 1–66 231266.00 98.79 190.74 100.0 SNORD37-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384304.1 ENST00000384304.1_2_72_+ 2–72 52429.00 68.29 43.24 93.51 SNORD59A-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384360.1 ENST00000384360.1_1_47_+ 1–47 1463.00 80.25 1.21 100.0 SNORA7B-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384390.1 ENST00000384390.1_1_87_+ 1–87 1994.00 85.69 1.64 100.0 SNORD14D-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384673.1 ENST00000384673.1_82_107_+ 82–107 183.00 11.77 0.15 100.0 Y_RNA.555-201 misc RNA neural progenitor cell (In vitro differentiated cells)
ENST00000384816.1 ENST00000384816.1_52_73_+ 52–73 8900.00 92.21 7.34 95.24 MIR25-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384819.1 ENST00000384819.1_7_28_+ 7–28 2835.00 94.91 2.34 99.54 MIR99B-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384832.1 ENST00000384832.1_58_78_+ 58–78 18.00 11.92 0.01 35.29 MIR23B-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384832.1 ENST00000384832.1_58_81_+ 58–81 126.00 83.44 0.10 94.74 MIR23B-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384836.1 ENST00000384836.1_66_87_+ 66–87 7.00 20.59 0.01 100.0 MIR203A-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384849.1 ENST00000384849.1_65_85_+ 65–85 2.00 28.57 0.00 100.0 MIR199B-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384849.1 ENST00000384849.1_26_48_+ 26–48 5.00 71.43 0.00 100.0 MIR199B-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384850.1 ENST00000384850.1_17_38_+ 17–38 114.00 89.06 0.09 100.0 MIR30B-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384853.1 ENST00000384853.1_36_58_+ 36–58 21.00 87.50 0.02 100.0 MIR181D-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384857.1 ENST00000384857.1_61_83_+ 61–83 1.00 100.00 0.00 100.0 MIR508-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384858.1 ENST00000384858.1_27_48_+ 27–48 5.00 83.33 0.00 100.0 MIR215-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384863.1 ENST00000384863.1_77_98_+ 77–98 35.00 2.54 0.03 100.0 MIR181A2-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384873.3 ENST00000384873.3_16_38_+ 16–38 60493.00 99.13 49.89 99.78 MIR191-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384879.1 ENST00000384879.1_15_37_+ 15–37 115.00 86.47 0.09 90.55 MIR149-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384881.1 ENST00000384881.1_27_48_+ 27–48 3.00 75.00 0.00 75.0 MIR181C-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384892.1 ENST00000384892.1_15_36_+ 15–36 17.00 85.00 0.01 100.0 MIR194-1-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384893.1 ENST00000384893.1_52_72_+ 52–72 334.00 86.75 0.28 90.51 MIR128-2-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384906.1 ENST00000384906.1_13_34_+ 13–34 2.00 100.00 0.00 100.0 MIR99A-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384918.1 ENST00000384918.1_14_35_+ 14–35 160.00 1.23 0.13 94.12 MIR28-201 miRNA neural progenitor cell (In vitro differentiated cells)