ENCFF193XIP

Library Details

Organism: Homo Sapiens
Biosample: neural progenitor cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR828LSC
Description: Part of ENCODE experiment ENCSR828LSC. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a neuronal pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384918.1 ENST00000384918.1_54_75_+ 54–75 11875.00 91.02 9.79 94.31 MIR28-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384918.1 ENST00000384918.1_14_35_+ 14–35 160.00 1.23 0.13 94.12 MIR28-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384958.1 ENST00000384958.1_27_48_+ 27–48 638.00 71.60 0.53 100.0 MIR183-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384988.1 ENST00000384988.1_15_36_+ 15–36 1104.00 92.23 0.91 95.67 MIR186-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384997.3 ENST00000384997.3_57_79_+ 57–79 179.00 89.95 0.15 100.0 MIR200B-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000384999.1 ENST00000384999.1_25_46_+ 25–46 1.00 25.00 0.00 100.0 MIR218-1-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385004.1 ENST00000385004.1_16_38_+ 16–38 478.00 92.28 0.39 95.79 MIR181B2-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385010.3 ENST00000385010.3_50_71_+ 50–71 5.00 100.00 0.00 100.0 MIR495-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385011.1 ENST00000385011.1_27_48_+ 27–48 34.00 77.27 0.03 77.27 MIR10B-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385018.1 ENST00000385018.1_51_71_+ 51–71 2766.86 46.95 2.28 52.08 MIR130B-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385018.1 ENST00000385018.1_13_34_+ 13–34 398.00 6.75 0.33 100.0 MIR130B-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385018.1 ENST00000385018.1_51_73_+ 51–73 2446.81 41.52 2.02 53.72 MIR130B-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385019.1 ENST00000385019.1_6_28_+ 6–28 1.00 33.33 0.00 100.0 MIR199A1-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385021.3 ENST00000385021.3_51_72_+ 51–72 3.00 60.00 0.00 100.0 MIR487B-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385024.1 ENST00000385024.1_11_31_+ 11–31 1001.93 22.63 0.83 28.99 MIR93-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385024.1 ENST00000385024.1_11_33_+ 11–33 3140.67 70.94 2.59 73.67 MIR93-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385025.1 ENST00000385025.1_20_41_+ 20–41 105.00 79.55 0.09 95.45 MIR532-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385045.1 ENST00000385045.1_20_41_+ 20–41 279.00 92.69 0.23 100.0 MIR15B-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385050.3 ENST00000385050.3_53_74_+ 53–74 7.00 58.33 0.01 100.0 MIR542-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385051.1 ENST00000385051.1_52_74_+ 52–74 313.00 78.05 0.26 100.0 MIR500A-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385092.1 ENST00000385092.1_6_29_+ 6–29 600.00 85.71 0.49 99.83 MIR30A-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385092.1 ENST00000385092.1_47_68_+ 47–68 67.00 9.57 0.06 100.0 MIR30A-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385092.1 ENST00000385092.1_6_21_+ 6–21 6.00 0.86 0.00 100.0 MIR30A-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385092.1 ENST00000385092.1_6_25_+ 6–25 12.00 1.71 0.01 92.31 MIR30A-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385129.3 ENST00000385129.3_19_40_+ 19–40 56.00 2.15 0.05 100.0 MIR27B-201 miRNA neural progenitor cell (In vitro differentiated cells)