ENCFF193XIP

Library Details

Organism: Homo Sapiens
Biosample: neural progenitor cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR828LSC
Description: Part of ENCODE experiment ENCSR828LSC. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a neuronal pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364915.1 ENST00000364915.1_2_74_+ 2–74 8035.00 49.20 6.63 59.45 SNORD117-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000364969.1 ENST00000364969.1_38_71_+ 38–71 7.00 0.38 0.01 100.0 SNORD114-3-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000364969.1 ENST00000364969.1_3_71_+ 3–71 1167.00 63.84 0.96 69.51 SNORD114-3-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000364969.1 ENST00000364969.1_4_62_+ 4–62 42.00 2.30 0.03 100.0 SNORD114-3-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000364991.1 ENST00000364991.1_17_30_+ 17–30 227.00 47.59 0.19 100.0 RNA5SP298-201 rRNA pseudogene neural progenitor cell (In vitro differentiated cells)
ENST00000365037.1 ENST00000365037.1_2_82_+ 2–82 91.00 77.12 0.08 100.0 SNORD115-38-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000365073.1 ENST00000365073.1_2_81_+ 2–81 170.00 69.11 0.14 100.0 SNORD115-10-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000365080.1 ENST00000365080.1_3_67_+ 3–67 64.00 60.95 0.05 100.0 SNORD113-9-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000365099.1 ENST00000365099.1_2_82_+ 2–82 74.00 56.06 0.06 100.0 SNORD115-20-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000365161.1 ENST00000365161.1_1_41_+ 1–41 126.00 0.71 0.10 100.0 SNORD38A-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 15529.00 87.80 12.81 100.0 SNORD38A-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000365161.1 ENST00000365161.1_1_38_+ 1–38 1456.00 8.23 1.20 100.0 SNORD38A-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000365178.1 ENST00000365178.1_4_67_+ 4–67 350.00 50.36 0.29 86.42 SNORD114-20-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000365328.1 ENST00000365328.1_246_331_+ 246–331 791.00 3.03 0.65 100.0 7SK.1-201 misc RNA neural progenitor cell (In vitro differentiated cells)
ENST00000365328.1 ENST00000365328.1_270_331_+ 270–331 2371.00 9.08 1.96 62.28 7SK.1-201 misc RNA neural progenitor cell (In vitro differentiated cells)
ENST00000365328.1 ENST00000365328.1_1_63_+ 1–63 293.00 1.12 0.24 85.67 7SK.1-201 misc RNA neural progenitor cell (In vitro differentiated cells)
ENST00000365328.1 ENST00000365328.1_238_331_+ 238–331 3357.00 12.86 2.77 100.0 7SK.1-201 misc RNA neural progenitor cell (In vitro differentiated cells)
ENST00000365328.1 ENST00000365328.1_273_331_+ 273–331 1661.00 6.36 1.37 74.65 7SK.1-201 misc RNA neural progenitor cell (In vitro differentiated cells)
ENST00000365328.1 ENST00000365328.1_260_331_+ 260–331 255.00 0.98 0.21 100.0 7SK.1-201 misc RNA neural progenitor cell (In vitro differentiated cells)
ENST00000365328.1 ENST00000365328.1_282_331_+ 282–331 2636.00 10.10 2.17 100.0 7SK.1-201 misc RNA neural progenitor cell (In vitro differentiated cells)
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 2540.00 9.73 2.09 81.83 7SK.1-201 misc RNA neural progenitor cell (In vitro differentiated cells)
ENST00000365328.1 ENST00000365328.1_1_76_+ 1–76 200.00 0.77 0.16 100.0 7SK.1-201 misc RNA neural progenitor cell (In vitro differentiated cells)
ENST00000365382.1 ENST00000365382.1_1_88_+ 1–88 2036.00 73.00 1.68 100.0 SNORD14C-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000365391.1 ENST00000365391.1_2_82_+ 2–82 82.00 71.30 0.07 100.0 SNORD115-44-201 snoRNA neural progenitor cell (In vitro differentiated cells)
ENST00000365394.1 ENST00000365394.1_85_96_+ 85–96 220.00 42.07 0.18 100.0 RNA5SP77-201 rRNA pseudogene neural progenitor cell (In vitro differentiated cells)