ENCFF193XIP

Library Details

Organism: Homo Sapiens
Biosample: neural progenitor cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR828LSC
Description: Part of ENCODE experiment ENCSR828LSC. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a neuronal pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385129.3 ENST00000385129.3_19_40_+ 19–40 56.00 2.15 0.05 100.0 MIR27B-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385196.1 ENST00000385196.1_15_36_+ 15–36 20.00 86.96 0.02 100.0 MIR577-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385199.1 ENST00000385199.1_51_70_+ 51–70 52.00 63.41 0.04 80.0 MIR654-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385200.3 ENST00000385200.3_33_54_+ 33–54 5719.00 95.56 4.72 96.39 MIR204-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385212.3 ENST00000385212.3_54_76_+ 54–76 44.00 93.62 0.04 100.0 MIR152-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385219.1 ENST00000385219.1_23_45_+ 23–45 12.00 57.14 0.01 100.0 MIR138-1-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385227.1 ENST00000385227.1_17_40_+ 17–40 1335.00 93.68 1.10 100.0 MIR30C1-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385235.3 ENST00000385235.3_16_37_+ 16–37 6.00 46.15 0.00 100.0 MIR660-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385236.1 ENST00000385236.1_55_76_+ 55–76 9.00 13.85 0.01 100.0 MIR125B1-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385236.1 ENST00000385236.1_15_37_+ 15–37 46.00 70.77 0.04 92.0 MIR125B1-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385254.3 ENST00000385254.3_16_37_+ 16–37 2.00 40.00 0.00 100.0 MIR493-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385254.3 ENST00000385254.3_57_78_+ 57–78 3.00 60.00 0.00 100.0 MIR493-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385255.3 ENST00000385255.3_23_44_+ 23–44 8453.93 24.11 6.97 26.31 MIR182-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385255.3 ENST00000385255.3_23_46_+ 23–46 28902.10 82.42 23.84 84.89 MIR182-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385259.1 ENST00000385259.1_13_34_+ 13–34 224.00 94.92 0.18 96.14 MIR100-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385261.1 ENST00000385261.1_51_73_+ 51–73 692.00 92.27 0.57 100.0 MIR301A-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 3254.00 43.59 2.68 67.75 MIR130A-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385274.1 ENST00000385274.1_55_74_+ 55–74 4149.00 55.58 3.42 68.87 MIR130A-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 23.00 95.83 0.02 95.83 MIRLET7F2-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 14.00 77.78 0.01 100.0 MIR652-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385279.1 ENST00000385279.1_16_37_+ 16–37 8.00 100.00 0.01 100.0 MIR653-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 686.00 62.71 0.57 100.0 MIR140-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385301.1 ENST00000385301.1_12_32_+ 12–32 83.00 13.93 0.07 100.0 MIR106B-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 57.00 9.56 0.05 51.82 MIR106B-201 miRNA neural progenitor cell (In vitro differentiated cells)
ENST00000386747.1 ENST00000386747.1_4_90_+ 4–90 44092.00 7.80 36.37 86.26 SNORD83A-201 snoRNA neural progenitor cell (In vitro differentiated cells)