ENCFF192PKY

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR961FIG
Description: Part of ENCODE experiment ENCSR961FIG. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 368.64 0.38 2.22 51.63 RNA5SP202-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 270.00 0.28 1.63 100.0 RNA5SP202-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 179.00 0.19 1.08 100.0 RNA5SP202-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000364370.1 ENST00000364370.1_35_67_+ 35–67 481.00 62.06 2.90 100.0 SNORD114-9-201 snoRNA upper lobe of left lung (Tissue)
ENST00000364370.1 ENST00000364370.1_4_67_+ 4–67 166.00 21.42 1.00 100.0 SNORD114-9-201 snoRNA upper lobe of left lung (Tissue)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 2276.00 14.43 13.72 100.0 Y_RNA.234-201 misc RNA upper lobe of left lung (Tissue)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 122.00 5.92 0.74 100.0 RNA5SP141-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000364687.1 ENST00000364687.1_34_67_+ 34–67 53.00 67.09 0.32 100.0 SNORD114-15-201 snoRNA upper lobe of left lung (Tissue)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 42.00 27.27 0.25 100.0 ENST00000364722 snoRNA upper lobe of left lung (Tissue)
ENST00000364830.3 ENST00000364830.3_3_67_+ 3–67 48.00 38.71 0.29 100.0 SNORD113-3-201 snoRNA upper lobe of left lung (Tissue)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 4073.00 72.65 24.56 100.0 SNORD52-201 snoRNA upper lobe of left lung (Tissue)
ENST00000364969.1 ENST00000364969.1_3_71_+ 3–71 143.00 45.83 0.86 100.0 SNORD114-3-201 snoRNA upper lobe of left lung (Tissue)
ENST00000364969.1 ENST00000364969.1_38_71_+ 38–71 130.00 41.67 0.78 100.0 SNORD114-3-201 snoRNA upper lobe of left lung (Tissue)
ENST00000364991.1 ENST00000364991.1_17_30_+ 17–30 17.00 1.79 0.10 100.0 RNA5SP298-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000365080.1 ENST00000365080.1_3_67_+ 3–67 110.00 66.27 0.66 100.0 SNORD113-9-201 snoRNA upper lobe of left lung (Tissue)
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 26022.00 81.42 156.92 100.0 SNORD38A-201 snoRNA upper lobe of left lung (Tissue)
ENST00000365161.1 ENST00000365161.1_1_38_+ 1–38 1664.00 5.21 10.03 100.0 SNORD38A-201 snoRNA upper lobe of left lung (Tissue)
ENST00000365161.1 ENST00000365161.1_1_41_+ 1–41 361.00 1.13 2.18 100.0 SNORD38A-201 snoRNA upper lobe of left lung (Tissue)
ENST00000365178.1 ENST00000365178.1_4_67_+ 4–67 1585.00 86.80 9.56 96.06 SNORD114-20-201 snoRNA upper lobe of left lung (Tissue)
ENST00000365328.1 ENST00000365328.1_273_331_+ 273–331 177.00 2.79 1.07 43.17 7SK.1-201 misc RNA upper lobe of left lung (Tissue)
ENST00000365328.1 ENST00000365328.1_1_63_+ 1–63 78.00 1.23 0.47 12.4 7SK.1-201 misc RNA upper lobe of left lung (Tissue)
ENST00000365328.1 ENST00000365328.1_282_331_+ 282–331 34.00 0.54 0.21 100.0 7SK.1-201 misc RNA upper lobe of left lung (Tissue)
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 1115.00 17.59 6.72 82.72 7SK.1-201 misc RNA upper lobe of left lung (Tissue)
ENST00000365328.1 ENST00000365328.1_270_331_+ 270–331 134.00 2.11 0.81 47.52 7SK.1-201 misc RNA upper lobe of left lung (Tissue)
ENST00000365394.1 ENST00000365394.1_85_96_+ 85–96 242.00 36.23 1.46 100.0 RNA5SP77-201 rRNA pseudogene upper lobe of left lung (Tissue)