ENCFF192PKY

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR961FIG
Description: Part of ENCODE experiment ENCSR961FIG. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362723.1 ENST00000362723.1_3_71_+ 3–71 25.00 69.44 0.15 100.0 SNORD114-14-201 snoRNA upper lobe of left lung (Tissue)
ENST00000362883.1 ENST00000362883.1_10_70_+ 10–70 205.00 0.38 1.24 100.0 SNORD104-201 snoRNA upper lobe of left lung (Tissue)
ENST00000362883.1 ENST00000362883.1_35_70_+ 35–70 2196.00 4.12 13.24 100.0 SNORD104-201 snoRNA upper lobe of left lung (Tissue)
ENST00000362973.1 ENST00000362973.1_96_117_+ 96–117 39721.00 47.33 239.52 54.07 RNA5SP358-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000363124.1 ENST00000363124.1_17_32_+ 17–32 72.00 3.11 0.43 80.9 RNA5SP145-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000363194.1 ENST00000363194.1_1_32_+ 1–32 15.00 5.56 0.09 100.0 RNY4P9-201 misc RNA upper lobe of left lung (Tissue)
ENST00000363286.1 ENST00000363286.1_68_116_+ 68–116 42.00 2.55 0.25 100.0 RNU5B-1-201 snRNA upper lobe of left lung (Tissue)
ENST00000363286.1 ENST00000363286.1_55_116_+ 55–116 181.00 11.00 1.09 100.0 RNU5B-1-201 snRNA upper lobe of left lung (Tissue)
ENST00000363286.1 ENST00000363286.1_63_116_+ 63–116 123.00 7.48 0.74 100.0 RNU5B-1-201 snRNA upper lobe of left lung (Tissue)
ENST00000363341.1 ENST00000363341.1_1_36_+ 1–36 14.00 0.64 0.08 51.85 RNY4P27-201 misc RNA upper lobe of left lung (Tissue)
ENST00000363341.1 ENST00000363341.1_1_32_+ 1–32 147.00 6.71 0.89 91.88 RNY4P27-201 misc RNA upper lobe of left lung (Tissue)
ENST00000363444.1 ENST00000363444.1_74_99_+ 74–99 805.00 32.91 4.85 100.0 Y_RNA.136-201 misc RNA upper lobe of left lung (Tissue)
ENST00000363742.1 ENST00000363742.1_4_67_+ 4–67 2254.00 92.15 13.59 97.11 SNORD114-25-201 snoRNA upper lobe of left lung (Tissue)
ENST00000363762.1 ENST00000363762.1_3_72_+ 3–72 651.00 93.67 3.93 100.0 SNORD113-7-201 snoRNA upper lobe of left lung (Tissue)
ENST00000363872.1 ENST00000363872.1_74_98_+ 74–98 196.00 38.06 1.18 100.0 Y_RNA.181-201 misc RNA upper lobe of left lung (Tissue)
ENST00000364228.1 ENST00000364228.1_1_39_+ 1–39 552.00 11.31 3.33 100.0 RNY1-201 misc RNA upper lobe of left lung (Tissue)
ENST00000364228.1 ENST00000364228.1_1_32_+ 1–32 1130.21 23.16 6.82 68.04 RNY1-201 misc RNA upper lobe of left lung (Tissue)
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 313.83 6.43 1.89 34.07 RNY1-201 misc RNA upper lobe of left lung (Tissue)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 430.00 8.81 2.59 100.0 RNY1-201 misc RNA upper lobe of left lung (Tissue)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 368.64 0.38 2.22 51.63 RNA5SP202-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 270.00 0.28 1.63 100.0 RNA5SP202-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 179.00 0.19 1.08 100.0 RNA5SP202-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 3478.00 3.60 20.97 100.0 RNA5SP202-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 3797.78 3.93 22.90 33.58 RNA5SP202-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000364315.1 ENST00000364315.1_62_119_+ 62–119 138.00 0.14 0.83 100.0 RNA5SP202-201 rRNA pseudogene upper lobe of left lung (Tissue)