ENCFF192PKY

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR961FIG
Description: Part of ENCODE experiment ENCSR961FIG. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365423.1 ENST00000365423.1_35_67_+ 35–67 2302.00 65.14 13.88 100.0 SNORD114-22-201 snoRNA upper lobe of left lung (Tissue)
ENST00000365423.1 ENST00000365423.1_4_67_+ 4–67 1152.00 32.60 6.95 97.63 SNORD114-22-201 snoRNA upper lobe of left lung (Tissue)
ENST00000365444.1 ENST00000365444.1_3_69_+ 3–69 4659.00 62.94 28.09 100.0 SNORD6-201 snoRNA upper lobe of left lung (Tissue)
ENST00000365444.1 ENST00000365444.1_30_69_+ 30–69 726.00 9.81 4.38 100.0 SNORD6-201 snoRNA upper lobe of left lung (Tissue)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 269.00 2.19 1.62 100.0 SNORD82-201 snoRNA upper lobe of left lung (Tissue)
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 1280.00 10.42 7.72 100.0 SNORD82-201 snoRNA upper lobe of left lung (Tissue)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 2165.20 17.63 13.06 57.01 SNORD82-201 snoRNA upper lobe of left lung (Tissue)
ENST00000365530.1 ENST00000365530.1_4_67_+ 4–67 1365.00 11.11 8.23 96.33 SNORD82-201 snoRNA upper lobe of left lung (Tissue)
ENST00000365530.1 ENST00000365530.1_37_67_+ 37–67 610.00 4.97 3.68 100.0 SNORD82-201 snoRNA upper lobe of left lung (Tissue)
ENST00000365530.1 ENST00000365530.1_30_67_+ 30–67 2065.00 16.81 12.45 94.81 SNORD82-201 snoRNA upper lobe of left lung (Tissue)
ENST00000365530.1 ENST00000365530.1_3_48_+ 3–48 1580.62 12.87 9.53 41.62 SNORD82-201 snoRNA upper lobe of left lung (Tissue)
ENST00000365699.4 ENST00000365699.4_9_32_+ 9–32 389395.00 97.01 2348.12 98.09 MIR146B-201 miRNA upper lobe of left lung (Tissue)
ENST00000366365.3 ENST00000366365.3_327_364_+ 327–364 3970.00 62.96 23.94 100.0 SNHG20-201 lncRNA upper lobe of left lung (Tissue)
ENST00000369825.6 ENST00000369825.6_405_425_+ 405–425 70.00 7.49 0.42 100.0 ATP5MK-205 protein coding upper lobe of left lung (Tissue)
ENST00000369825.6 ENST00000369825.6_444_466_+ 444–466 162.00 17.34 0.98 100.0 ATP5MK-205 protein coding upper lobe of left lung (Tissue)
ENST00000377186.4 ENST00000377186.4_697_717_+ 697–717 4.00 1.12 0.02 100.0 LINC01556-201 lncRNA upper lobe of left lung (Tissue)
ENST00000378755.9 ENST00000378755.9_1289_1300_+ 1289–1300 516.00 43.25 3.11 100.0 ATAD3A-202 protein coding upper lobe of left lung (Tissue)
ENST00000381414.8 ENST00000381414.8_4377_4392_+ 4377–4392 20.00 9.85 0.12 37.74 TMC5-202 protein coding upper lobe of left lung (Tissue)
ENST00000382874.6 ENST00000382874.6_779_809_+ 779–809 38.00 76.00 0.23 100.0 ZMYM2-203 protein coding upper lobe of left lung (Tissue)
ENST00000383858.1 ENST00000383858.1_151_164_+ 151–164 60.00 1.79 0.36 100.0 RNVU1-7-201 snRNA upper lobe of left lung (Tissue)
ENST00000383924.1 ENST00000383924.1_85_107_+ 85–107 335.00 83.54 2.02 100.0 Y_RNA.389-201 misc RNA upper lobe of left lung (Tissue)
ENST00000384027.1 ENST00000384027.1_30_70_+ 30–70 213.00 0.38 1.28 100.0 SNORD101-201 snoRNA upper lobe of left lung (Tissue)
ENST00000384027.1 ENST00000384027.1_3_70_+ 3–70 52662.00 93.28 317.56 99.7 SNORD101-201 snoRNA upper lobe of left lung (Tissue)
ENST00000384027.1 ENST00000384027.1_42_70_+ 42–70 1259.00 2.23 7.59 100.0 SNORD101-201 snoRNA upper lobe of left lung (Tissue)
ENST00000384048.1 ENST00000384048.1_1_66_+ 1–66 62535.00 97.09 377.10 100.0 SNORD37-201 snoRNA upper lobe of left lung (Tissue)