ENCFF192PKY

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR961FIG
Description: Part of ENCODE experiment ENCSR961FIG. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000776279.1 ENST00000776279.1_161_234_+ 161–234 189.00 0.23 1.14 52.79 SNHG25-206 lncRNA upper lobe of left lung (Tissue)
ENST00000776279.1 ENST00000776279.1_161_206_+ 161–206 231.00 0.28 1.39 100.0 SNHG25-206 lncRNA upper lobe of left lung (Tissue)
ENST00000779378.1 ENST00000779378.1_905_928_+ 905–928 1158.00 86.87 6.98 89.98 MIR155HG-205 lncRNA upper lobe of left lung (Tissue)
ENST00000784740.1 ENST00000784740.1_245_265_+ 245–265 4.00 66.67 0.02 100.0 ENST00000784740 lncRNA upper lobe of left lung (Tissue)
ENST00000785178.1 ENST00000785178.1_899_938_+ 899–938 5.00 0.01 0.03 100.0 ENST00000785178 lncRNA upper lobe of left lung (Tissue)
ENST00000786284.1 ENST00000786284.1_46_80_+ 46–80 1315.00 22.66 7.93 100.0 ENST00000786284 lncRNA upper lobe of left lung (Tissue)
ENST00000786284.1 ENST00000786284.1_38_80_+ 38–80 115.00 1.98 0.69 72.78 ENST00000786284 lncRNA upper lobe of left lung (Tissue)
ENST00000786284.1 ENST00000786284.1_40_80_+ 40–80 43.00 0.74 0.26 32.09 ENST00000786284 lncRNA upper lobe of left lung (Tissue)
ENST00000797550.1 ENST00000797550.1_9_63_+ 9–63 3093.08 14.35 18.65 51.78 ENST00000797550 lncRNA upper lobe of left lung (Tissue)
ENST00000797550.1 ENST00000797550.1_7_63_+ 7–63 2444.14 11.34 14.74 40.92 ENST00000797550 lncRNA upper lobe of left lung (Tissue)
ENST00000797550.1 ENST00000797550.1_9_52_+ 9–52 11525.00 53.46 69.50 84.57 ENST00000797550 lncRNA upper lobe of left lung (Tissue)
ENST00000806893.1 ENST00000806893.1_465_486_+ 465–486 496.00 0.06 2.99 100.0 MIR181A1HG-212 lncRNA upper lobe of left lung (Tissue)
ENST00000806893.1 ENST00000806893.1_425_447_+ 425–447 773939.00 87.40 4666.98 93.03 MIR181A1HG-212 lncRNA upper lobe of left lung (Tissue)
ENST00000812667.1 ENST00000812667.1_308_348_+ 308–348 59.00 51.30 0.36 100.0 C19orf48P-218 lncRNA upper lobe of left lung (Tissue)
ENST00000815283.1 ENST00000815283.1_298_361_+ 298–361 1580.00 23.31 9.53 96.34 SNHG18-220 lncRNA upper lobe of left lung (Tissue)
ENST00000817026.1 ENST00000817026.1_659_679_+ 659–679 308.00 0.76 1.86 100.0 ENST00000817026 lncRNA upper lobe of left lung (Tissue)
ENST00000823279.1 ENST00000823279.1_109_169_+ 109–169 222.79 2.88 1.34 57.57 ENST00000823279 lncRNA upper lobe of left lung (Tissue)
ENST00000823279.1 ENST00000823279.1_131_169_+ 131–169 18.00 0.23 0.11 69.23 ENST00000823279 lncRNA upper lobe of left lung (Tissue)
ENST00000823279.1 ENST00000823279.1_103_169_+ 103–169 33.54 0.43 0.20 63.27 ENST00000823279 lncRNA upper lobe of left lung (Tissue)
ENST00000823279.1 ENST00000823279.1_107_169_+ 107–169 134.31 1.74 0.81 32.6 ENST00000823279 lncRNA upper lobe of left lung (Tissue)
ENST00000823279.1 ENST00000823279.1_105_169_+ 105–169 37.32 0.48 0.23 24.4 ENST00000823279 lncRNA upper lobe of left lung (Tissue)
ENST00000823279.1 ENST00000823279.1_151_169_+ 151–169 1059.47 13.69 6.39 30.63 ENST00000823279 lncRNA upper lobe of left lung (Tissue)
ENST00000823801.1 ENST00000823801.1_153_169_+ 153–169 2965.55 38.33 17.88 81.72 ENST00000823801 lncRNA upper lobe of left lung (Tissue)
ENST00000827714.1 ENST00000827714.1_110_129_+ 110–129 260.00 60.47 1.57 73.24 ENST00000827714 lncRNA upper lobe of left lung (Tissue)
ENST00000827714.1 ENST00000827714.1_110_131_+ 110–131 95.00 22.09 0.57 26.76 ENST00000827714 lncRNA upper lobe of left lung (Tissue)