ENCFF192PKY

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR961FIG
Description: Part of ENCODE experiment ENCSR961FIG. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362298.3 ENST00000362298.3_42_63_+ 42–63 23.00 71.88 0.14 100.0 MIR374A-201 miRNA upper lobe of left lung (Tissue)
ENST00000362307.1 ENST00000362307.1_8_29_+ 8–29 10.00 90.91 0.06 100.0 MIR31-201 miRNA upper lobe of left lung (Tissue)
ENST00000362400.1 ENST00000362400.1_58_95_+ 58–95 156.95 0.16 0.95 61.31 RNA5S12-201 rRNA upper lobe of left lung (Tissue)
ENST00000362400.1 ENST00000362400.1_1_32_+ 1–32 47.00 0.05 0.28 82.46 RNA5S12-201 rRNA upper lobe of left lung (Tissue)
ENST00000362400.1 ENST00000362400.1_1_49_+ 1–49 45.00 0.05 0.27 70.31 RNA5S12-201 rRNA upper lobe of left lung (Tissue)
ENST00000362400.1 ENST00000362400.1_79_95_+ 79–95 460.00 0.47 2.77 33.12 RNA5S12-201 rRNA upper lobe of left lung (Tissue)
ENST00000362400.1 ENST00000362400.1_56_95_+ 56–95 135.81 0.14 0.82 42.84 RNA5S12-201 rRNA upper lobe of left lung (Tissue)
ENST00000362400.1 ENST00000362400.1_32_95_+ 32–95 229.00 0.23 1.38 71.12 RNA5S12-201 rRNA upper lobe of left lung (Tissue)
ENST00000362400.1 ENST00000362400.1_26_95_+ 26–95 44.00 0.04 0.27 100.0 RNA5S12-201 rRNA upper lobe of left lung (Tissue)
ENST00000362400.1 ENST00000362400.1_1_58_+ 1–58 39.00 0.04 0.24 100.0 RNA5S12-201 rRNA upper lobe of left lung (Tissue)
ENST00000362400.1 ENST00000362400.1_14_32_+ 14–32 73.00 0.07 0.44 100.0 RNA5S12-201 rRNA upper lobe of left lung (Tissue)
ENST00000362400.1 ENST00000362400.1_83_95_+ 83–95 2495.00 2.53 15.05 72.87 RNA5S12-201 rRNA upper lobe of left lung (Tissue)
ENST00000362415.1 ENST00000362415.1_74_100_+ 74–100 315.00 35.39 1.90 100.0 Y_RNA.14-201 misc RNA upper lobe of left lung (Tissue)
ENST00000362607.1 ENST00000362607.1_1_25_+ 1–25 6737.00 51.31 40.63 100.0 SNORA31-201 snoRNA upper lobe of left lung (Tissue)
ENST00000362610.1 ENST00000362610.1_1_53_+ 1–53 16.00 0.67 0.10 45.71 RNA5SP389-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000362610.1 ENST00000362610.1_1_42_+ 1–42 43.00 1.81 0.26 76.79 RNA5SP389-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000362610.1 ENST00000362610.1_1_70_+ 1–70 18.00 0.76 0.11 100.0 RNA5SP389-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000362698.1 ENST00000362698.1_72_116_+ 72–116 183.00 1.58 1.10 100.0 RNU5A-1-201 snRNA upper lobe of left lung (Tissue)
ENST00000362698.1 ENST00000362698.1_66_116_+ 66–116 375.68 3.24 2.27 22.38 RNU5A-1-201 snRNA upper lobe of left lung (Tissue)
ENST00000362698.1 ENST00000362698.1_55_116_+ 55–116 743.00 6.41 4.48 65.23 RNU5A-1-201 snRNA upper lobe of left lung (Tissue)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 1211.00 10.44 7.30 63.44 RNU5A-1-201 snRNA upper lobe of left lung (Tissue)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 1083.00 9.34 6.53 61.67 RNU5A-1-201 snRNA upper lobe of left lung (Tissue)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 1390.69 11.99 8.39 82.78 RNU5A-1-201 snRNA upper lobe of left lung (Tissue)
ENST00000362698.1 ENST00000362698.1_60_116_+ 60–116 2485.00 21.42 14.98 69.98 RNU5A-1-201 snRNA upper lobe of left lung (Tissue)
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 1258.00 10.84 7.59 68.37 RNU5A-1-201 snRNA upper lobe of left lung (Tissue)