ENCFF192PKY

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR961FIG
Description: Part of ENCODE experiment ENCSR961FIG. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000699460.1 ENST00000699460.1_1872_1893_+ 1872–1893 3.00 1.57 0.02 100.0 MEG9-206 lncRNA upper lobe of left lung (Tissue)
ENST00000703637.1 ENST00000703637.1_459_481_+ 459–481 548.00 11.59 3.30 100.0 DNAJC5-203 nonsense mediated decay upper lobe of left lung (Tissue)
ENST00000707189.1 ENST00000707189.1_1316_1333_+ 1316–1333 23587.00 60.10 142.23 100.0 ENST00000707189 TEC upper lobe of left lung (Tissue)
ENST00000710424.1 ENST00000710424.1_1740_1762_+ 1740–1762 93.00 0.17 0.56 100.0 MIR17HG-214 lncRNA upper lobe of left lung (Tissue)
ENST00000710424.1 ENST00000710424.1_2162_2183_+ 2162–2183 20464.27 36.65 123.40 41.05 MIR17HG-214 lncRNA upper lobe of left lung (Tissue)
ENST00000710424.1 ENST00000710424.1_2162_2185_+ 2162–2185 33832.33 60.59 204.01 65.99 MIR17HG-214 lncRNA upper lobe of left lung (Tissue)
ENST00000710424.1 ENST00000710424.1_2046_2067_+ 2046–2067 1098.00 1.97 6.62 100.0 MIR17HG-214 lncRNA upper lobe of left lung (Tissue)
ENST00000710424.1 ENST00000710424.1_2069_2124_+ 2069–2124 30.00 0.05 0.18 100.0 MIR17HG-214 lncRNA upper lobe of left lung (Tissue)
ENST00000710424.1 ENST00000710424.1_1873_1895_+ 1873–1895 17.00 0.03 0.10 100.0 MIR17HG-214 lncRNA upper lobe of left lung (Tissue)
ENST00000710424.1 ENST00000710424.1_1419_1441_+ 1419–1441 67.00 0.12 0.40 100.0 MIR17HG-214 lncRNA upper lobe of left lung (Tissue)
ENST00000718227.1 ENST00000718227.1_356_419_+ 356–419 195020.00 90.55 1176.00 100.0 SNHG32-223 lncRNA upper lobe of left lung (Tissue)
ENST00000718227.1 ENST00000718227.1_356_384_+ 356–384 12243.00 5.68 73.83 100.0 SNHG32-223 lncRNA upper lobe of left lung (Tissue)
ENST00000718227.1 ENST00000718227.1_387_419_+ 387–419 582.00 0.27 3.51 100.0 SNHG32-223 lncRNA upper lobe of left lung (Tissue)
ENST00000718227.1 ENST00000718227.1_359_419_+ 359–419 53.00 0.02 0.32 100.0 SNHG32-223 lncRNA upper lobe of left lung (Tissue)
ENST00000718227.1 ENST00000718227.1_352_421_+ 352–421 4620.00 2.15 27.86 83.44 SNHG32-223 lncRNA upper lobe of left lung (Tissue)
ENST00000718231.1 ENST00000718231.1_1964_2016_+ 1964–2016 29.00 0.11 0.17 100.0 SNHG32-227 lncRNA upper lobe of left lung (Tissue)
ENST00000718231.1 ENST00000718231.1_1950_2016_+ 1950–2016 23580.00 93.09 142.19 99.68 SNHG32-227 lncRNA upper lobe of left lung (Tissue)
ENST00000718231.1 ENST00000718231.1_1988_2016_+ 1988–2016 655.00 2.59 3.95 100.0 SNHG32-227 lncRNA upper lobe of left lung (Tissue)
ENST00000718231.1 ENST00000718231.1_1955_2016_+ 1955–2016 30.00 0.12 0.18 100.0 SNHG32-227 lncRNA upper lobe of left lung (Tissue)
ENST00000718311.1 ENST00000718311.1_841_855_+ 841–855 1457.00 73.36 8.79 100.0 B4GALT1-203 nonsense mediated decay upper lobe of left lung (Tissue)
ENST00000722183.1 ENST00000722183.1_143_158_+ 143–158 2625.00 8.99 15.83 76.93 ENST00000722183 lncRNA upper lobe of left lung (Tissue)
ENST00000722183.1 ENST00000722183.1_57_79_+ 57–79 524.00 1.79 3.16 100.0 ENST00000722183 lncRNA upper lobe of left lung (Tissue)
ENST00000722183.1 ENST00000722183.1_126_158_+ 126–158 682.00 2.33 4.11 100.0 ENST00000722183 lncRNA upper lobe of left lung (Tissue)
ENST00000726427.1 ENST00000726427.1_819_841_+ 819–841 288.00 18.98 1.74 100.0 MIR34BHG-202 lncRNA upper lobe of left lung (Tissue)
ENST00000730292.1 ENST00000730292.1_241_262_+ 241–262 8822.00 63.58 53.20 71.38 THBS3-AS1-228 lncRNA upper lobe of left lung (Tissue)