ENCFF181JNF

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR866ZSG
Description: Part of ENCODE experiment ENCSR866ZSG. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384850.1 ENST00000384850.1_17_38_+ 17–38 1071.00 96.66 4.07 100.0 MIR30B-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384853.1 ENST00000384853.1_36_58_+ 36–58 310.00 95.09 1.18 100.0 MIR181D-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384857.1 ENST00000384857.1_61_83_+ 61–83 3.00 100.00 0.01 100.0 MIR508-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384858.1 ENST00000384858.1_27_48_+ 27–48 28.00 96.55 0.11 100.0 MIR215-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384863.1 ENST00000384863.1_77_98_+ 77–98 274.00 1.57 1.04 100.0 MIR181A2-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384873.3 ENST00000384873.3_16_38_+ 16–38 65189.00 99.01 247.87 99.43 MIR191-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384879.1 ENST00000384879.1_15_37_+ 15–37 31.00 81.58 0.12 81.58 MIR149-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384881.1 ENST00000384881.1_66_87_+ 66–87 32.00 10.06 0.12 100.0 MIR181C-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384881.1 ENST00000384881.1_27_48_+ 27–48 281.00 88.36 1.07 100.0 MIR181C-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384892.1 ENST00000384892.1_15_36_+ 15–36 3.00 33.33 0.01 100.0 MIR194-1-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384893.1 ENST00000384893.1_52_72_+ 52–72 397.00 83.40 1.51 85.93 MIR128-2-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384906.1 ENST00000384906.1_13_34_+ 13–34 1109.00 79.73 4.22 86.3 MIR99A-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384918.1 ENST00000384918.1_14_35_+ 14–35 703.00 0.26 2.67 85.42 MIR28-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384918.1 ENST00000384918.1_54_71_+ 54–71 4086.00 1.52 15.54 100.0 MIR28-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384918.1 ENST00000384918.1_54_75_+ 54–75 248701.00 92.76 945.64 94.89 MIR28-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384958.1 ENST00000384958.1_27_48_+ 27–48 11.00 84.62 0.04 100.0 MIR183-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384967.1 ENST00000384967.1_16_38_+ 16–38 10449.00 78.42 39.73 100.0 MIR145-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384967.1 ENST00000384967.1_56_76_+ 56–76 1122.00 8.42 4.27 100.0 MIR145-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384988.1 ENST00000384988.1_15_36_+ 15–36 4629.00 98.22 17.60 99.29 MIR186-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384997.3 ENST00000384997.3_57_79_+ 57–79 3.00 100.00 0.01 100.0 MIR200B-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384999.1 ENST00000384999.1_25_46_+ 25–46 42.00 25.15 0.16 100.0 MIR218-1-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385004.1 ENST00000385004.1_16_38_+ 16–38 1002.00 94.89 3.81 97.85 MIR181B2-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385011.1 ENST00000385011.1_27_48_+ 27–48 759412.00 88.56 2887.52 88.99 MIR10B-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385018.1 ENST00000385018.1_51_73_+ 51–73 12.21 20.02 0.05 29.79 MIR130B-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385018.1 ENST00000385018.1_51_71_+ 51–71 34.25 56.15 0.13 68.51 MIR130B-201 miRNA gastroesophageal sphincter (Tissue)