ENCFF181JNF

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR866ZSG
Description: Part of ENCODE experiment ENCSR866ZSG. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385018.1 ENST00000385018.1_13_34_+ 13–34 8.00 13.11 0.03 100.0 MIR130B-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385019.1 ENST00000385019.1_6_28_+ 6–28 698.00 19.67 2.65 100.0 MIR199A1-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385021.3 ENST00000385021.3_51_72_+ 51–72 1.00 100.00 0.00 100.0 MIR487B-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385024.1 ENST00000385024.1_11_33_+ 11–33 156.52 50.65 0.60 57.54 MIR93-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385024.1 ENST00000385024.1_11_31_+ 11–31 113.62 36.77 0.43 43.87 MIR93-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385025.1 ENST00000385025.1_20_41_+ 20–41 373.00 91.20 1.42 97.14 MIR532-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385045.1 ENST00000385045.1_20_41_+ 20–41 17.00 68.00 0.06 100.0 MIR15B-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385048.3 ENST00000385048.3_16_37_+ 16–37 293.00 80.49 1.11 100.0 MIR150-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385050.3 ENST00000385050.3_53_74_+ 53–74 16.00 66.67 0.06 100.0 MIR542-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385051.1 ENST00000385051.1_51_71_+ 51–71 7.00 4.35 0.03 100.0 MIR500A-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385051.1 ENST00000385051.1_52_74_+ 52–74 101.00 62.73 0.38 100.0 MIR500A-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385092.1 ENST00000385092.1_6_25_+ 6–25 7900.00 32.20 30.04 95.07 MIR30A-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385092.1 ENST00000385092.1_6_21_+ 6–21 645.00 2.63 2.45 100.0 MIR30A-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385092.1 ENST00000385092.1_6_29_+ 6–29 14153.00 57.68 53.81 97.18 MIR30A-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385092.1 ENST00000385092.1_47_68_+ 47–68 1073.00 4.37 4.08 100.0 MIR30A-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385129.3 ENST00000385129.3_61_80_+ 61–80 66789.00 90.85 253.95 93.92 MIR27B-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385129.3 ENST00000385129.3_19_40_+ 19–40 514.00 0.70 1.95 100.0 MIR27B-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385189.3 ENST00000385189.3_25_47_+ 25–47 4.00 100.00 0.02 100.0 MIR196A2-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385196.1 ENST00000385196.1_15_36_+ 15–36 1.00 33.33 0.00 100.0 MIR577-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385199.1 ENST00000385199.1_51_70_+ 51–70 42.00 63.64 0.16 79.25 MIR654-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385200.3 ENST00000385200.3_33_54_+ 33–54 62.00 93.94 0.24 100.0 MIR204-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385212.3 ENST00000385212.3_54_76_+ 54–76 836.00 92.99 3.18 100.0 MIR152-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385219.1 ENST00000385219.1_23_45_+ 23–45 5.00 27.78 0.02 100.0 MIR138-1-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385227.1 ENST00000385227.1_17_40_+ 17–40 1158.00 93.99 4.40 100.0 MIR30C1-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385235.3 ENST00000385235.3_16_37_+ 16–37 27.00 84.38 0.10 100.0 MIR660-201 miRNA gastroesophageal sphincter (Tissue)