ENCFF181JNF

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR866ZSG
Description: Part of ENCODE experiment ENCSR866ZSG. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365161.1 ENST00000365161.1_1_41_+ 1–41 158.00 0.87 0.60 100.0 SNORD38A-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 16872.00 92.78 64.15 100.0 SNORD38A-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000365161.1 ENST00000365161.1_1_38_+ 1–38 445.00 2.45 1.69 100.0 SNORD38A-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000365178.1 ENST00000365178.1_4_67_+ 4–67 1017.00 83.63 3.87 97.51 SNORD114-20-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 677.00 18.03 2.57 86.46 7SK.1-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000365328.1 ENST00000365328.1_238_331_+ 238–331 18.00 0.48 0.07 100.0 7SK.1-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000365328.1 ENST00000365328.1_282_331_+ 282–331 174.00 4.64 0.66 100.0 7SK.1-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000365328.1 ENST00000365328.1_270_331_+ 270–331 542.00 14.44 2.06 70.12 7SK.1-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000365328.1 ENST00000365328.1_273_331_+ 273–331 443.00 11.80 1.68 80.69 7SK.1-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000365328.1 ENST00000365328.1_260_331_+ 260–331 8.00 0.21 0.03 100.0 7SK.1-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000365328.1 ENST00000365328.1_246_331_+ 246–331 48.00 1.28 0.18 100.0 7SK.1-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000365382.1 ENST00000365382.1_1_88_+ 1–88 561.00 66.71 2.13 100.0 SNORD14C-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000365391.1 ENST00000365391.1_2_82_+ 2–82 68.00 17.99 0.26 100.0 SNORD115-44-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000365394.1 ENST00000365394.1_85_96_+ 85–96 4527.00 92.92 17.21 100.0 RNA5SP77-201 rRNA pseudogene gastroesophageal sphincter (Tissue)
ENST00000365423.1 ENST00000365423.1_35_67_+ 35–67 7866.00 86.15 29.91 100.0 SNORD114-22-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000365423.1 ENST00000365423.1_4_67_+ 4–67 921.00 10.09 3.50 95.34 SNORD114-22-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000365444.1 ENST00000365444.1_30_69_+ 30–69 205.00 6.62 0.78 100.0 SNORD6-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000365444.1 ENST00000365444.1_3_69_+ 3–69 2373.00 76.62 9.02 100.0 SNORD6-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000365484.1 ENST00000365484.1_1_95_+ 1–95 35.00 0.40 0.13 100.0 RNY3-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000365530.1 ENST00000365530.1_30_67_+ 30–67 2414.00 14.99 9.18 90.38 SNORD82-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000365530.1 ENST00000365530.1_3_48_+ 3–48 2834.16 17.60 10.78 40.47 SNORD82-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 4143.44 25.74 15.75 59.17 SNORD82-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 316.00 1.96 1.20 100.0 SNORD82-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 138.00 0.86 0.52 100.0 SNORD82-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000365530.1 ENST00000365530.1_4_67_+ 4–67 4146.00 25.75 15.76 99.52 SNORD82-201 snoRNA gastroesophageal sphincter (Tissue)