ENCFF181JNF

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR866ZSG
Description: Part of ENCODE experiment ENCSR866ZSG. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 505.00 0.36 1.92 100.0 RNA5SP202-201 rRNA pseudogene gastroesophageal sphincter (Tissue)
ENST00000364315.1 ENST00000364315.1_52_119_+ 52–119 217.00 0.16 0.83 100.0 RNA5SP202-201 rRNA pseudogene gastroesophageal sphincter (Tissue)
ENST00000364315.1 ENST00000364315.1_37_95_+ 37–95 12585.56 8.99 47.85 65.37 RNA5SP202-201 rRNA pseudogene gastroesophageal sphincter (Tissue)
ENST00000364315.1 ENST00000364315.1_87_119_+ 87–119 152.00 0.11 0.58 100.0 RNA5SP202-201 rRNA pseudogene gastroesophageal sphincter (Tissue)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 3701.99 2.64 14.08 47.27 RNA5SP202-201 rRNA pseudogene gastroesophageal sphincter (Tissue)
ENST00000364370.1 ENST00000364370.1_35_67_+ 35–67 4159.00 83.72 15.81 100.0 SNORD114-9-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000364370.1 ENST00000364370.1_4_67_+ 4–67 171.00 3.44 0.65 100.0 SNORD114-9-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 4580.00 4.67 17.41 100.0 Y_RNA.234-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000364451.1 ENST00000364451.1_1_95_+ 1–95 938.00 2.34 3.57 100.0 RNA5S9-201 rRNA gastroesophageal sphincter (Tissue)
ENST00000364461.1 ENST00000364461.1_2_82_+ 2–82 40.00 43.96 0.15 100.0 SNORD115-23-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 11.00 0.43 0.04 100.0 RNA5SP141-201 rRNA pseudogene gastroesophageal sphincter (Tissue)
ENST00000364687.1 ENST00000364687.1_34_67_+ 34–67 550.00 78.12 2.09 100.0 SNORD114-15-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 10.00 7.09 0.04 100.0 ENST00000364722 snoRNA gastroesophageal sphincter (Tissue)
ENST00000364809.1 ENST00000364809.1_2_81_+ 2–81 207.00 25.97 0.79 100.0 SNORD115-15-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000364830.3 ENST00000364830.3_3_67_+ 3–67 104.00 59.09 0.40 100.0 SNORD113-3-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 2506.00 67.47 9.53 100.0 SNORD52-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000364915.1 ENST00000364915.1_1_76_+ 1–76 137.00 4.07 0.52 17.25 SNORD117-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000364915.1 ENST00000364915.1_2_74_+ 2–74 1415.00 42.09 5.38 91.17 SNORD117-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000364969.1 ENST00000364969.1_38_71_+ 38–71 207.00 10.83 0.79 100.0 SNORD114-3-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000364969.1 ENST00000364969.1_3_71_+ 3–71 1413.00 73.90 5.37 96.71 SNORD114-3-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000364991.1 ENST00000364991.1_17_30_+ 17–30 127.00 10.48 0.48 100.0 RNA5SP298-201 rRNA pseudogene gastroesophageal sphincter (Tissue)
ENST00000365037.1 ENST00000365037.1_2_82_+ 2–82 82.00 18.51 0.31 100.0 SNORD115-38-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000365073.1 ENST00000365073.1_2_81_+ 2–81 189.00 22.85 0.72 100.0 SNORD115-10-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000365080.1 ENST00000365080.1_3_67_+ 3–67 397.00 73.25 1.51 100.0 SNORD113-9-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000365099.1 ENST00000365099.1_2_82_+ 2–82 11.00 19.64 0.04 100.0 SNORD115-20-201 snoRNA gastroesophageal sphincter (Tissue)