ENCFF181JNF

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR866ZSG
Description: Part of ENCODE experiment ENCSR866ZSG. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 3120.00 11.66 11.86 78.59 MT-RNR2-201 Mt rRNA gastroesophageal sphincter (Tissue)
ENST00000387365.1 ENST00000387365.1_1_58_+ 1–58 225.00 20.57 0.86 100.0 MT-TI-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387365.1 ENST00000387365.1_1_51_+ 1–51 244.00 22.30 0.93 95.69 MT-TI-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387372.1 ENST00000387372.1_1_55_+ 1–55 32.00 0.09 0.12 100.0 MT-TQ-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387372.1 ENST00000387372.1_1_36_+ 1–36 14500.00 42.40 55.13 92.32 MT-TQ-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387372.1 ENST00000387372.1_1_30_+ 1–30 6171.02 18.05 23.46 65.89 MT-TQ-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387372.1 ENST00000387372.1_1_32_+ 1–32 8663.99 25.34 32.94 60.19 MT-TQ-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387377.1 ENST00000387377.1_1_51_+ 1–51 269.00 10.45 1.02 100.0 MT-TM-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387377.1 ENST00000387377.1_1_31_+ 1–31 635.00 24.68 2.41 87.35 MT-TM-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387405.1 ENST00000387405.1_1_24_+ 1–24 213.00 2.81 0.81 100.0 MT-TC-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387409.1 ENST00000387409.1_1_65_+ 1–65 3442.00 16.38 13.09 100.0 MT-TY-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387409.1 ENST00000387409.1_1_56_+ 1–56 38.00 0.18 0.14 100.0 MT-TY-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387409.1 ENST00000387409.1_1_28_+ 1–28 347.00 1.65 1.32 100.0 MT-TY-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387409.1 ENST00000387409.1_1_37_+ 1–37 8029.00 38.21 30.53 85.25 MT-TY-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387409.1 ENST00000387409.1_1_50_+ 1–50 14.00 0.07 0.05 100.0 MT-TY-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387409.1 ENST00000387409.1_1_32_+ 1–32 3875.00 18.44 14.73 61.41 MT-TY-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387419.1 ENST00000387419.1_1_51_+ 1–51 64.00 38.32 0.24 100.0 MT-TD-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387421.1 ENST00000387421.1_1_28_+ 1–28 102.00 1.19 0.39 100.0 MT-TK-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387421.1 ENST00000387421.1_1_52_+ 1–52 2475.00 28.84 9.41 100.0 MT-TK-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387421.1 ENST00000387421.1_1_31_+ 1–31 239.00 2.79 0.91 100.0 MT-TK-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387421.1 ENST00000387421.1_1_58_+ 1–58 3238.00 37.73 12.31 100.0 MT-TK-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387449.1 ENST00000387449.1_1_26_+ 1–26 63.00 1.99 0.24 100.0 MT-TS2-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387449.1 ENST00000387449.1_1_53_+ 1–53 96.00 3.03 0.37 100.0 MT-TS2-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387449.1 ENST00000387449.1_1_20_+ 1–20 285.00 9.00 1.08 89.34 MT-TS2-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387456.1 ENST00000387456.1_1_31_+ 1–31 68.00 4.95 0.26 100.0 MT-TL2-201 Mt tRNA gastroesophageal sphincter (Tissue)