ENCFF158HXL

Library Details

Organism: Homo Sapiens
Biosample: right lobe of liver (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR603XUX
Description: Part of ENCODE experiment ENCSR603XUX. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's right lobe of liver tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000655317.2 ENST00000655317.2_283_352_+ 283–352 16602.00 55.37 142.19 83.92 ENST00000655317 lncRNA right lobe of liver (Tissue)
ENST00000655600.1 ENST00000655600.1_807_842_+ 807–842 1057.00 2.22 9.05 80.08 LINC01962-202 lncRNA right lobe of liver (Tissue)
ENST00000655600.1 ENST00000655600.1_807_839_+ 807–839 37556.00 78.75 321.65 100.0 LINC01962-202 lncRNA right lobe of liver (Tissue)
ENST00000655600.1 ENST00000655600.1_807_829_+ 807–829 2226.00 4.67 19.06 100.0 LINC01962-202 lncRNA right lobe of liver (Tissue)
ENST00000656987.1 ENST00000656987.1_14_79_+ 14–79 971.00 84.66 8.32 100.0 MEG8-228 lncRNA right lobe of liver (Tissue)
ENST00000658801.2 ENST00000658801.2_139_171_+ 139–171 343.00 1.71 2.94 100.0 LIMD1-AS1-204 lncRNA right lobe of liver (Tissue)
ENST00000658801.2 ENST00000658801.2_178_214_+ 178–214 2948.00 14.67 25.25 93.56 LIMD1-AS1-204 lncRNA right lobe of liver (Tissue)
ENST00000659483.3 ENST00000659483.3_1071_1093_+ 1071–1093 704.00 21.12 6.03 84.82 MIR99AHG-262 lncRNA right lobe of liver (Tissue)
ENST00000659483.3 ENST00000659483.3_1110_1131_+ 1110–1131 1897.00 56.92 16.25 100.0 MIR99AHG-262 lncRNA right lobe of liver (Tissue)
ENST00000661688.1 ENST00000661688.1_928_950_+ 928–950 40.00 57.97 0.34 97.56 MIR9-2HG-225 lncRNA right lobe of liver (Tissue)
ENST00000661815.1 ENST00000661815.1_36_69_+ 36–69 344.00 51.81 2.95 100.0 MEG8-233 lncRNA right lobe of liver (Tissue)
ENST00000661815.1 ENST00000661815.1_2_70_+ 2–70 43.00 6.48 0.37 100.0 MEG8-233 lncRNA right lobe of liver (Tissue)
ENST00000662228.1 ENST00000662228.1_1206_1269_+ 1206–1269 112.00 37.33 0.96 100.0 MEG8-234 lncRNA right lobe of liver (Tissue)
ENST00000662228.1 ENST00000662228.1_1205_1272_+ 1205–1272 56.00 18.67 0.48 100.0 MEG8-234 lncRNA right lobe of liver (Tissue)
ENST00000665787.1 ENST00000665787.1_2059_2127_+ 2059–2127 73.00 40.56 0.63 100.0 MEG8-240 lncRNA right lobe of liver (Tissue)
ENST00000666663.1 ENST00000666663.1_35_81_+ 35–81 41.00 20.30 0.35 100.0 SNHG14-306 lncRNA right lobe of liver (Tissue)
ENST00000666735.2 ENST00000666735.2_72_128_+ 72–128 139.00 4.28 1.19 100.0 ENST00000666735 lncRNA right lobe of liver (Tissue)
ENST00000666735.2 ENST00000666735.2_77_128_+ 77–128 42.00 1.29 0.36 100.0 ENST00000666735 lncRNA right lobe of liver (Tissue)
ENST00000666972.1 ENST00000666972.1_2488_2551_+ 2488–2551 219.00 65.57 1.88 100.0 MEG8-242 lncRNA right lobe of liver (Tissue)
ENST00000667814.1 ENST00000667814.1_36_68_+ 36–68 69.00 0.46 0.59 100.0 MEG8-244 lncRNA right lobe of liver (Tissue)
ENST00000667814.1 ENST00000667814.1_2_32_+ 2–32 112.00 0.75 0.96 100.0 MEG8-244 lncRNA right lobe of liver (Tissue)
ENST00000667814.1 ENST00000667814.1_2_68_+ 2–68 14400.00 96.94 123.33 99.43 MEG8-244 lncRNA right lobe of liver (Tissue)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 1357.00 0.37 11.62 100.0 SNHG1-248 lncRNA right lobe of liver (Tissue)
ENST00000668048.2 ENST00000668048.2_2195_2223_+ 2195–2223 11208.00 3.08 95.99 98.44 SNHG1-248 lncRNA right lobe of liver (Tissue)
ENST00000668048.2 ENST00000668048.2_523_581_+ 523–581 263.07 0.07 2.25 52.4 SNHG1-248 lncRNA right lobe of liver (Tissue)