ENCFF158HXL

Library Details

Organism: Homo Sapiens
Biosample: right lobe of liver (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR603XUX
Description: Part of ENCODE experiment ENCSR603XUX. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's right lobe of liver tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668048.2 ENST00000668048.2_1946_1982_+ 1946–1982 1385.00 0.38 11.86 89.94 SNHG1-248 lncRNA right lobe of liver (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1982_+ 1921–1982 88421.00 24.31 757.27 99.69 SNHG1-248 lncRNA right lobe of liver (Tissue)
ENST00000668048.2 ENST00000668048.2_2522_2560_+ 2522–2560 856.00 0.24 7.33 67.35 SNHG1-248 lncRNA right lobe of liver (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2223_+ 2157–2223 83268.00 22.89 713.14 99.28 SNHG1-248 lncRNA right lobe of liver (Tissue)
ENST00000668048.2 ENST00000668048.2_2532_2560_+ 2532–2560 11281.00 3.10 96.62 100.0 SNHG1-248 lncRNA right lobe of liver (Tissue)
ENST00000668048.2 ENST00000668048.2_2496_2560_+ 2496–2560 33642.00 9.25 288.12 99.84 SNHG1-248 lncRNA right lobe of liver (Tissue)
ENST00000668048.2 ENST00000668048.2_523_570_+ 523–570 102.00 0.03 0.87 100.0 SNHG1-248 lncRNA right lobe of liver (Tissue)
ENST00000668048.2 ENST00000668048.2_847_874_+ 847–874 112.00 0.03 0.96 100.0 SNHG1-248 lncRNA right lobe of liver (Tissue)
ENST00000668048.2 ENST00000668048.2_523_549_+ 523–549 670.00 0.18 5.74 100.0 SNHG1-248 lncRNA right lobe of liver (Tissue)
ENST00000668048.2 ENST00000668048.2_523_584_+ 523–584 71.00 0.02 0.61 100.0 SNHG1-248 lncRNA right lobe of liver (Tissue)
ENST00000668048.2 ENST00000668048.2_287_322_+ 287–322 462.00 0.13 3.96 100.0 SNHG1-248 lncRNA right lobe of liver (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2173_+ 2157–2173 47082.00 12.94 403.23 100.0 SNHG1-248 lncRNA right lobe of liver (Tissue)
ENST00000668048.2 ENST00000668048.2_258_296_+ 258–296 123.00 0.03 1.05 100.0 SNHG1-248 lncRNA right lobe of liver (Tissue)
ENST00000668048.2 ENST00000668048.2_2184_2223_+ 2184–2223 1104.00 0.30 9.46 100.0 SNHG1-248 lncRNA right lobe of liver (Tissue)
ENST00000668048.2 ENST00000668048.2_258_324_+ 258–324 39450.00 10.84 337.87 80.67 SNHG1-248 lncRNA right lobe of liver (Tissue)
ENST00000668048.2 ENST00000668048.2_524_594_+ 524–594 423.00 0.12 3.62 84.1 SNHG1-248 lncRNA right lobe of liver (Tissue)
ENST00000668048.2 ENST00000668048.2_2514_2560_+ 2514–2560 21.00 0.01 0.18 100.0 SNHG1-248 lncRNA right lobe of liver (Tissue)
ENST00000668048.2 ENST00000668048.2_1936_1982_+ 1936–1982 12.00 0.00 0.10 100.0 SNHG1-248 lncRNA right lobe of liver (Tissue)
ENST00000668048.2 ENST00000668048.2_806_874_+ 806–874 2593.00 0.71 22.21 100.0 SNHG1-248 lncRNA right lobe of liver (Tissue)
ENST00000668048.2 ENST00000668048.2_1953_1982_+ 1953–1982 919.00 0.25 7.87 84.0 SNHG1-248 lncRNA right lobe of liver (Tissue)
ENST00000668048.2 ENST00000668048.2_523_579_+ 523–579 223.49 0.06 1.91 44.52 SNHG1-248 lncRNA right lobe of liver (Tissue)
ENST00000668048.2 ENST00000668048.2_565_594_+ 565–594 1087.00 0.30 9.31 100.0 SNHG1-248 lncRNA right lobe of liver (Tissue)
ENST00000668048.2 ENST00000668048.2_1949_1982_+ 1949–1982 510.00 0.14 4.37 55.37 SNHG1-248 lncRNA right lobe of liver (Tissue)
ENST00000668048.2 ENST00000668048.2_2160_2223_+ 2160–2223 1232.00 0.34 10.55 100.0 SNHG1-248 lncRNA right lobe of liver (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1978_+ 1921–1978 43.00 0.01 0.37 100.0 SNHG1-248 lncRNA right lobe of liver (Tissue)