ENCFF158HXL

Library Details

Organism: Homo Sapiens
Biosample: right lobe of liver (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR603XUX
Description: Part of ENCODE experiment ENCSR603XUX. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's right lobe of liver tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000485101.5 ENST00000485101.5_343_413_+ 343–413 1.00 0.00 0.01 100.0 EIF4A2-219 retained intron right lobe of liver (Tissue)
ENST00000485101.5 ENST00000485101.5_343_405_+ 343–405 416788.00 70.24 3569.55 98.55 EIF4A2-219 retained intron right lobe of liver (Tissue)
ENST00000485101.5 ENST00000485101.5_365_408_+ 365–408 2618.00 0.44 22.42 29.31 EIF4A2-219 retained intron right lobe of liver (Tissue)
ENST00000485101.5 ENST00000485101.5_2108_2152_+ 2108–2152 81.00 0.01 0.69 100.0 EIF4A2-219 retained intron right lobe of liver (Tissue)
ENST00000485101.5 ENST00000485101.5_365_405_+ 365–405 53714.00 9.05 460.03 82.4 EIF4A2-219 retained intron right lobe of liver (Tissue)
ENST00000485706.5 ENST00000485706.5_456_524_+ 456–524 45.00 7.72 0.39 100.0 RPL7A-206 protein coding CDS not defined right lobe of liver (Tissue)
ENST00000485706.5 ENST00000485706.5_456_485_+ 456–485 127.00 21.78 1.09 100.0 RPL7A-206 protein coding CDS not defined right lobe of liver (Tissue)
ENST00000485706.5 ENST00000485706.5_486_524_+ 486–524 221.00 37.91 1.89 100.0 RPL7A-206 protein coding CDS not defined right lobe of liver (Tissue)
ENST00000485756.1 ENST00000485756.1_173_189_+ 173–189 6.00 0.00 0.05 100.0 RPL21-209 retained intron right lobe of liver (Tissue)
ENST00000485756.1 ENST00000485756.1_123_168_+ 123–168 9443.00 1.61 80.87 100.0 RPL21-209 retained intron right lobe of liver (Tissue)
ENST00000485756.1 ENST00000485756.1_138_189_+ 138–189 1017.00 0.17 8.71 100.0 RPL21-209 retained intron right lobe of liver (Tissue)
ENST00000485756.1 ENST00000485756.1_122_192_+ 122–192 13774.00 2.34 117.97 95.95 RPL21-209 retained intron right lobe of liver (Tissue)
ENST00000485756.1 ENST00000485756.1_123_189_+ 123–189 559912.00 95.19 4795.32 98.61 RPL21-209 retained intron right lobe of liver (Tissue)
ENST00000486255.1 ENST00000486255.1_1073_1096_+ 1073–1096 72.00 27.59 0.62 100.0 GABRE-209 retained intron right lobe of liver (Tissue)
ENST00000488946.1 ENST00000488946.1_844_886_+ 844–886 42.00 0.89 0.36 100.0 RPL13A-212 retained intron right lobe of liver (Tissue)
ENST00000488946.1 ENST00000488946.1_197_235_+ 197–235 217.00 4.61 1.86 100.0 RPL13A-212 retained intron right lobe of liver (Tissue)
ENST00000489392.1 ENST00000489392.1_151_188_+ 151–188 354.00 16.41 3.03 100.0 RPL7A-207 protein coding CDS not defined right lobe of liver (Tissue)
ENST00000489392.1 ENST00000489392.1_151_191_+ 151–191 228.00 10.57 1.95 100.0 RPL7A-207 protein coding CDS not defined right lobe of liver (Tissue)
ENST00000493449.5 ENST00000493449.5_96_109_+ 96–109 103.00 70.55 0.88 100.0 RGS11-208 retained intron right lobe of liver (Tissue)
ENST00000494697.5 ENST00000494697.5_306_348_+ 306–348 2312.00 76.43 19.80 94.18 NOP56-217 protein coding CDS not defined right lobe of liver (Tissue)
ENST00000496055.5 ENST00000496055.5_505_553_+ 505–553 5020.00 19.07 42.99 100.0 RABGGTB-213 protein coding CDS not defined right lobe of liver (Tissue)
ENST00000496055.5 ENST00000496055.5_493_553_+ 493–553 6057.00 23.01 51.87 100.0 RABGGTB-213 protein coding CDS not defined right lobe of liver (Tissue)
ENST00000496055.5 ENST00000496055.5_471_517_+ 471–517 800.00 3.04 6.85 47.62 RABGGTB-213 protein coding CDS not defined right lobe of liver (Tissue)
ENST00000496055.5 ENST00000496055.5_2059_2126_+ 2059–2126 2453.00 9.32 21.01 86.71 RABGGTB-213 protein coding CDS not defined right lobe of liver (Tissue)
ENST00000496055.5 ENST00000496055.5_2059_2091_+ 2059–2091 260.00 0.99 2.23 100.0 RABGGTB-213 protein coding CDS not defined right lobe of liver (Tissue)