ENCFF106XDA

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR295NAK
Description: Part of ENCODE experiment ENCSR295NAK. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362283.1 ENST00000362283.1_6_29_+ 6–29 10791.00 69.08 48.29 93.31 MIR30D-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362291.1 ENST00000362291.1_52_73_+ 52–73 1087.00 19.99 4.86 95.18 MIR126-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362291.1 ENST00000362291.1_15_35_+ 15–35 4202.00 77.27 18.80 100.0 MIR126-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362298.3 ENST00000362298.3_42_63_+ 42–63 60.00 58.25 0.27 100.0 MIR374A-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362307.1 ENST00000362307.1_8_29_+ 8–29 2.00 66.67 0.01 100.0 MIR31-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362400.1 ENST00000362400.1_1_83_+ 1–83 75.00 0.05 0.34 75.76 RNA5S12-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000362400.1 ENST00000362400.1_1_49_+ 1–49 92.00 0.07 0.41 50.83 RNA5S12-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000362400.1 ENST00000362400.1_1_58_+ 1–58 27.00 0.02 0.12 100.0 RNA5S12-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000362400.1 ENST00000362400.1_26_95_+ 26–95 39.00 0.03 0.17 33.62 RNA5S12-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000362400.1 ENST00000362400.1_14_32_+ 14–32 71.00 0.05 0.32 100.0 RNA5S12-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000362400.1 ENST00000362400.1_15_95_+ 15–95 97.73 0.07 0.44 40.55 RNA5S12-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000362400.1 ENST00000362400.1_5_95_+ 5–95 1156.00 0.84 5.17 83.53 RNA5S12-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000362400.1 ENST00000362400.1_20_95_+ 20–95 185.00 0.13 0.83 51.82 RNA5S12-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000362400.1 ENST00000362400.1_1_32_+ 1–32 89.00 0.06 0.40 67.42 RNA5S12-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000362400.1 ENST00000362400.1_1_45_+ 1–45 28.00 0.02 0.13 100.0 RNA5S12-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000362400.1 ENST00000362400.1_58_95_+ 58–95 49.05 0.04 0.22 51.09 RNA5S12-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000362400.1 ENST00000362400.1_17_95_+ 17–95 186.87 0.14 0.84 57.15 RNA5S12-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000362400.1 ENST00000362400.1_79_95_+ 79–95 43.00 0.03 0.19 47.78 RNA5S12-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000362400.1 ENST00000362400.1_12_95_+ 12–95 79.00 0.06 0.35 84.95 RNA5S12-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000362400.1 ENST00000362400.1_56_95_+ 56–95 77.48 0.06 0.35 57.82 RNA5S12-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000362400.1 ENST00000362400.1_32_95_+ 32–95 170.00 0.12 0.76 52.47 RNA5S12-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000362400.1 ENST00000362400.1_23_95_+ 23–95 471.00 0.34 2.11 83.36 RNA5S12-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000362400.1 ENST00000362400.1_1_95_+ 1–95 56898.00 41.26 254.62 99.6 RNA5S12-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000362400.1 ENST00000362400.1_83_95_+ 83–95 278.00 0.20 1.24 85.54 RNA5S12-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000362415.1 ENST00000362415.1_74_100_+ 74–100 128.00 16.45 0.57 100.0 Y_RNA.14-201 misc RNA esophagus muscularis mucosa (Tissue)