ENCFF106XDA

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR295NAK
Description: Part of ENCODE experiment ENCSR295NAK. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362154.1 ENST00000362154.1_48_70_+ 48–70 4018.00 86.91 17.98 93.33 MIR103A2-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362155.4 ENST00000362155.4_44_64_+ 44–64 2.00 40.00 0.01 100.0 MIR369-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362155.4 ENST00000362155.4_9_29_+ 9–29 3.00 60.00 0.01 100.0 MIR369-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362162.1 ENST00000362162.1_14_35_+ 14–35 30.00 29.13 0.13 100.0 MIR425-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362162.1 ENST00000362162.1_14_38_+ 14–38 26.00 25.24 0.12 100.0 MIR425-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362168.1 ENST00000362168.1_66_87_+ 66–87 66.00 55.00 0.30 100.0 MIR210-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362177.3 ENST00000362177.3_43_64_+ 43–64 32002.00 96.88 143.21 97.73 MIR378A-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362181.3 ENST00000362181.3_6_27_+ 6–27 361.00 70.10 1.62 100.0 MIR361-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362195.3 ENST00000362195.3_49_70_+ 49–70 9421.00 92.64 42.16 96.72 MIR101-2-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362195.3 ENST00000362195.3_48_66_+ 48–66 179.00 1.76 0.80 35.94 MIR101-2-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362199.3 ENST00000362199.3_51_71_+ 51–71 2.00 66.67 0.01 100.0 MIR323A-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362205.1 ENST00000362205.1_10_31_+ 10–31 244050.00 99.42 1092.13 99.64 MIR26A1-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362207.3 ENST00000362207.3_15_35_+ 15–35 9.00 64.29 0.04 100.0 MIR129-2-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362212.1 ENST00000362212.1_61_83_+ 61–83 337.00 78.01 1.51 100.0 MIR342-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362215.3 ENST00000362215.3_6_27_+ 6–27 64.00 0.42 0.29 100.0 MIR148A-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362215.3 ENST00000362215.3_44_65_+ 44–65 13810.00 90.83 61.80 91.68 MIR148A-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362222.4 ENST00000362222.4_50_70_+ 50–70 82.00 97.62 0.37 100.0 MIR410-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362237.3 ENST00000362237.3_15_37_+ 15–37 8.00 1.56 0.04 100.0 MIR409-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362237.3 ENST00000362237.3_47_68_+ 47–68 455.00 88.52 2.04 100.0 MIR409-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362239.4 ENST00000362239.4_16_36_+ 16–36 304.00 99.67 1.36 100.0 MIR411-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362251.4 ENST00000362251.4_12_33_+ 12–33 4683.00 93.06 20.96 94.84 MIR26B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362252.3 ENST00000362252.3_63_86_+ 63–86 299.00 71.88 1.34 75.51 MIR148B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362280.3 ENST00000362280.3_5_26_+ 5–26 8881.00 95.73 39.74 98.33 MIRLET7G-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362283.1 ENST00000362283.1_6_29_+ 6–29 10791.00 69.08 48.29 93.31 MIR30D-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362283.1 ENST00000362283.1_6_25_+ 6–25 3587.00 22.96 16.05 82.25 MIR30D-201 miRNA esophagus muscularis mucosa (Tissue)