ENCFF106XDA

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR295NAK
Description: Part of ENCODE experiment ENCSR295NAK. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000619323.3 ENST00000619323.3_499_520_+ 499–520 40505.00 97.09 181.26 98.53 ENST00000619323 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000625402.1 ENST00000625402.1_2_49_+ 2–49 104.00 18.37 0.47 100.0 SCARNA4-202 scaRNA esophagus muscularis mucosa (Tissue)
ENST00000625572.1 ENST00000625572.1_23_92_+ 23–92 614.00 68.68 2.75 100.0 ENST00000625572 miRNA esophagus muscularis mucosa (Tissue)
ENST00000628177.1 ENST00000628177.1_1_79_+ 1–79 10290.00 97.12 46.05 100.0 ENST00000628177 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000630615.1 ENST00000630615.1_10_70_+ 10–70 518.00 78.72 2.32 100.0 ENST00000630615 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000635183.1 ENST00000635183.1_1617_1632_+ 1617–1632 139.00 50.55 0.62 100.0 DMRT2-209 protein coding esophagus muscularis mucosa (Tissue)
ENST00000635183.1 ENST00000635183.1_323_334_+ 323–334 25.00 9.09 0.11 100.0 DMRT2-209 protein coding esophagus muscularis mucosa (Tissue)
ENST00000636377.1 ENST00000636377.1_38_65_+ 38–65 686.00 37.42 3.07 100.0 SNORD98-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000636377.1 ENST00000636377.1_2_65_+ 2–65 185.00 10.09 0.83 100.0 SNORD98-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000636668.1 ENST00000636668.1_3209_3232_+ 3209–3232 19793.68 69.06 88.58 71.74 MIR106AHG-201 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3393_+ 3371–3393 4.33 0.02 0.02 33.29 MIR106AHG-201 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000636668.1 ENST00000636668.1_2902_2924_+ 2902–2924 7.00 0.02 0.03 100.0 MIR106AHG-201 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3391_+ 3371–3391 7.67 0.03 0.03 58.98 MIR106AHG-201 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000638012.2 ENST00000638012.2_1_28_+ 1–28 181.00 53.71 0.81 100.0 MEG8-222 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000638012.2 ENST00000638012.2_1_70_+ 1–70 86.00 25.52 0.38 100.0 MEG8-222 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000640631.2 ENST00000640631.2_7388_7482_+ 7388–7482 8254.00 13.65 36.94 98.1 SNHG14-224 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4215_+ 4125–4215 24801.00 41.02 110.99 96.69 SNHG14-224 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000640631.2 ENST00000640631.2_9465_9551_+ 9465–9551 13394.00 22.15 59.94 100.0 SNHG14-224 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000640631.2 ENST00000640631.2_5267_5357_+ 5267–5357 7338.00 12.14 32.84 95.63 SNHG14-224 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4168_+ 4125–4168 85.00 0.14 0.38 100.0 SNHG14-224 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000640631.2 ENST00000640631.2_7389_7479_+ 7389–7479 745.00 1.23 3.33 42.26 SNHG14-224 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000640631.2 ENST00000640631.2_288_349_+ 288–349 348.00 0.58 1.56 70.88 SNHG14-224 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000640631.2 ENST00000640631.2_287_352_+ 287–352 299.00 0.49 1.34 71.19 SNHG14-224 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000648813.1 ENST00000648813.1_104_120_+ 104–120 2631.04 5.50 11.77 45.92 5S_rRNA.20-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000649692.2 ENST00000649692.2_3826_3892_+ 3826–3892 118.00 4.56 0.53 100.0 HSPA9-211 retained intron esophagus muscularis mucosa (Tissue)