ENCFF106XDA

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR295NAK
Description: Part of ENCODE experiment ENCSR295NAK. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 124.00 35.63 0.55 65.26 MIR106B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000386747.1 ENST00000386747.1_4_90_+ 4–90 30447.00 44.13 136.25 96.22 SNORD83A-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000386747.1 ENST00000386747.1_4_93_+ 4–93 36510.00 52.92 163.38 97.01 SNORD83A-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 1157.00 74.17 5.18 100.0 SNORD41-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 803.00 23.12 3.59 60.65 MT-TF-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 47.00 1.35 0.21 100.0 MT-TF-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 148.00 4.26 0.66 58.73 MT-TF-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 490.00 18.01 2.19 100.0 MT-TV-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 269.00 2.55 1.20 77.97 MT-RNR2-201 Mt rRNA esophagus muscularis mucosa (Tissue)
ENST00000387347.2 ENST00000387347.2_74_96_+ 74–96 23.00 0.22 0.10 100.0 MT-RNR2-201 Mt rRNA esophagus muscularis mucosa (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 65.00 0.62 0.29 100.0 MT-RNR2-201 Mt rRNA esophagus muscularis mucosa (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1531_+ 1500–1531 455.00 4.31 2.04 89.74 MT-RNR2-201 Mt rRNA esophagus muscularis mucosa (Tissue)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 67.00 0.63 0.30 100.0 MT-RNR2-201 Mt rRNA esophagus muscularis mucosa (Tissue)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 40.00 0.38 0.18 100.0 MT-RNR2-201 Mt rRNA esophagus muscularis mucosa (Tissue)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 2.00 0.02 0.01 100.0 MT-RNR2-201 Mt rRNA esophagus muscularis mucosa (Tissue)
ENST00000387365.1 ENST00000387365.1_1_51_+ 1–51 156.00 13.39 0.70 93.98 MT-TI-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387365.1 ENST00000387365.1_1_58_+ 1–58 331.00 28.41 1.48 100.0 MT-TI-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387372.1 ENST00000387372.1_1_55_+ 1–55 65.00 0.16 0.29 100.0 MT-TQ-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387372.1 ENST00000387372.1_1_32_+ 1–32 5771.64 14.09 25.83 57.77 MT-TQ-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387372.1 ENST00000387372.1_1_36_+ 1–36 23463.00 57.28 105.00 96.72 MT-TQ-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387372.1 ENST00000387372.1_1_30_+ 1–30 3872.17 9.45 17.33 64.34 MT-TQ-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387377.1 ENST00000387377.1_1_51_+ 1–51 276.00 8.09 1.24 100.0 MT-TM-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387377.1 ENST00000387377.1_1_31_+ 1–31 750.00 21.97 3.36 56.95 MT-TM-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387405.1 ENST00000387405.1_1_24_+ 1–24 235.00 6.82 1.05 100.0 MT-TC-201 Mt tRNA esophagus muscularis mucosa (Tissue)
ENST00000387409.1 ENST00000387409.1_1_65_+ 1–65 22592.00 32.00 101.10 100.0 MT-TY-201 Mt tRNA esophagus muscularis mucosa (Tissue)