ENCFF106XDA

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR295NAK
Description: Part of ENCODE experiment ENCSR295NAK. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385092.1 ENST00000385092.1_6_29_+ 6–29 104839.00 81.76 469.16 97.26 MIR30A-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385129.3 ENST00000385129.3_61_80_+ 61–80 119340.00 90.74 534.05 93.39 MIR27B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385129.3 ENST00000385129.3_19_40_+ 19–40 1064.00 0.81 4.76 100.0 MIR27B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385189.3 ENST00000385189.3_25_47_+ 25–47 1.00 100.00 0.00 100.0 MIR196A2-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385196.1 ENST00000385196.1_15_36_+ 15–36 1.00 100.00 0.00 100.0 MIR577-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385199.1 ENST00000385199.1_51_70_+ 51–70 53.00 69.74 0.24 76.81 MIR654-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385200.3 ENST00000385200.3_33_54_+ 33–54 70.00 94.59 0.31 95.89 MIR204-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385212.3 ENST00000385212.3_54_76_+ 54–76 1050.00 93.42 4.70 100.0 MIR152-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385219.1 ENST00000385219.1_23_45_+ 23–45 5.00 62.50 0.02 100.0 MIR138-1-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385227.1 ENST00000385227.1_17_40_+ 17–40 1591.00 91.81 7.12 100.0 MIR30C1-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385235.3 ENST00000385235.3_16_37_+ 16–37 44.00 73.33 0.20 100.0 MIR660-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385236.1 ENST00000385236.1_15_37_+ 15–37 3720.00 65.03 16.65 82.98 MIR125B1-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385236.1 ENST00000385236.1_55_76_+ 55–76 562.00 9.83 2.51 100.0 MIR125B1-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385254.3 ENST00000385254.3_57_78_+ 57–78 6.00 37.50 0.03 100.0 MIR493-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385254.3 ENST00000385254.3_16_37_+ 16–37 5.00 31.25 0.02 100.0 MIR493-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385255.3 ENST00000385255.3_23_44_+ 23–44 346.61 29.05 1.55 31.98 MIR182-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385255.3 ENST00000385255.3_23_46_+ 23–46 619.07 51.89 2.77 54.88 MIR182-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385259.1 ENST00000385259.1_13_34_+ 13–34 15427.00 92.44 69.04 94.55 MIR100-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385261.1 ENST00000385261.1_51_73_+ 51–73 201.00 96.63 0.90 100.0 MIR301A-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385274.1 ENST00000385274.1_55_74_+ 55–74 3311.00 93.19 14.82 97.53 MIR130A-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 232.00 6.53 1.04 52.02 MIR130A-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 201676.00 98.19 902.51 98.82 MIRLET7F2-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 114.00 82.01 0.51 100.0 MIR652-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 2521.00 80.34 11.28 100.0 MIR140-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 124.00 35.63 0.55 65.26 MIR106B-201 miRNA esophagus muscularis mucosa (Tissue)