ENCFF081QYT

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR289GGY
Description: Part of ENCODE experiment ENCSR289GGY. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362912.1 ENST00000362912.1_2_82_+ 2–82 606.00 69.26 1.11 91.68 SNORD115-9-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000362973.1 ENST00000362973.1_96_117_+ 96–117 15162.00 58.13 27.68 74.12 RNA5SP358-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000363124.1 ENST00000363124.1_17_32_+ 17–32 186.00 3.82 0.34 53.45 RNA5SP145-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000363194.1 ENST00000363194.1_1_32_+ 1–32 3.00 0.92 0.01 100.0 RNY4P9-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000363286.1 ENST00000363286.1_1_78_+ 1–78 3.00 0.06 0.01 100.0 RNU5B-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000363286.1 ENST00000363286.1_55_116_+ 55–116 1410.00 26.83 2.57 100.0 RNU5B-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000363286.1 ENST00000363286.1_63_116_+ 63–116 350.00 6.66 0.64 100.0 RNU5B-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000363286.1 ENST00000363286.1_68_116_+ 68–116 29.00 0.55 0.05 100.0 RNU5B-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000363293.1 ENST00000363293.1_2_82_+ 2–82 4035.00 90.92 7.37 97.3 SNORD115-18-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000363341.1 ENST00000363341.1_1_32_+ 1–32 30.00 4.43 0.05 96.77 RNY4P27-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000363341.1 ENST00000363341.1_1_36_+ 1–36 3.00 0.44 0.01 75.0 RNY4P27-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000363444.1 ENST00000363444.1_74_99_+ 74–99 324.00 16.87 0.59 100.0 Y_RNA.136-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000363608.1 ENST00000363608.1_2_82_+ 2–82 244.00 65.07 0.45 100.0 SNORD115-41-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000363633.1 ENST00000363633.1_2_82_+ 2–82 5.00 3.31 0.01 100.0 SNORD115-5-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000363723.1 ENST00000363723.1_2_82_+ 2–82 92.00 60.53 0.17 100.0 SNORD115-33-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000363742.1 ENST00000363742.1_4_67_+ 4–67 3029.00 92.49 5.53 97.65 SNORD114-25-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000363762.1 ENST00000363762.1_3_72_+ 3–72 5272.00 97.52 9.62 100.0 SNORD113-7-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000363856.1 ENST00000363856.1_2_82_+ 2–82 63.00 52.94 0.11 100.0 SNORD115-8-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000363872.1 ENST00000363872.1_74_98_+ 74–98 149.00 27.90 0.27 100.0 Y_RNA.181-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000363887.1 ENST00000363887.1_2_82_+ 2–82 63.00 35.59 0.11 100.0 SNORD115-16-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364079.1 ENST00000364079.1_2_82_+ 2–82 210.00 51.47 0.38 100.0 SNORD115-32-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364117.1 ENST00000364117.1_2_82_+ 2–82 71.00 79.78 0.13 100.0 SNORD115-30-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364228.1 ENST00000364228.1_1_32_+ 1–32 1108.69 28.12 2.02 77.86 RNY1-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 197.41 5.01 0.36 18.18 RNY1-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 32.00 0.81 0.06 100.0 RNY1-201 misc RNA esophagus squamous epithelium (Tissue)