ENCFF081QYT

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR289GGY
Description: Part of ENCODE experiment ENCSR289GGY. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362441.1 ENST00000362441.1_2_82_+ 2–82 58.00 30.37 0.11 100.0 SNORD115-34-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000362477.1 ENST00000362477.1_70_120_+ 70–120 5.00 0.79 0.01 100.0 RNU5E-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000362545.1 ENST00000362545.1_1_85_+ 1–85 15.00 0.31 0.03 21.74 RNA5SP370-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000362607.1 ENST00000362607.1_1_25_+ 1–25 13.00 2.21 0.02 100.0 SNORA31-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000362610.1 ENST00000362610.1_1_76_+ 1–76 34.00 0.70 0.06 100.0 RNA5SP389-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000362610.1 ENST00000362610.1_1_42_+ 1–42 36.00 0.74 0.07 65.45 RNA5SP389-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000362610.1 ENST00000362610.1_1_53_+ 1–53 24.00 0.49 0.04 20.51 RNA5SP389-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000362610.1 ENST00000362610.1_1_70_+ 1–70 606.00 12.44 1.11 100.0 RNA5SP389-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000362698.1 ENST00000362698.1_72_116_+ 72–116 679.00 1.16 1.24 100.0 RNU5A-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000362698.1 ENST00000362698.1_60_116_+ 60–116 3087.00 5.26 5.63 78.79 RNU5A-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 1569.00 2.67 2.86 72.04 RNU5A-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000362698.1 ENST00000362698.1_29_116_+ 29–116 2983.00 5.08 5.45 34.04 RNU5A-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000362698.1 ENST00000362698.1_55_116_+ 55–116 1057.00 1.80 1.93 73.81 RNU5A-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000362698.1 ENST00000362698.1_40_116_+ 40–116 1761.00 3.00 3.21 100.0 RNU5A-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000362698.1 ENST00000362698.1_36_116_+ 36–116 3450.00 5.88 6.30 82.65 RNU5A-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 796.00 1.36 1.45 40.57 RNU5A-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000362698.1 ENST00000362698.1_22_116_+ 22–116 22819.99 38.89 41.65 82.02 RNU5A-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 1047.00 1.78 1.91 65.97 RNU5A-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000362698.1 ENST00000362698.1_66_116_+ 66–116 235.29 0.40 0.43 56.29 RNU5A-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 212.17 0.36 0.39 63.33 RNU5A-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000362698.1 ENST00000362698.1_24_116_+ 24–116 635.74 1.08 1.16 2.23 RNU5A-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000362698.1 ENST00000362698.1_34_116_+ 34–116 1174.00 2.00 2.14 28.82 RNU5A-1-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000362723.1 ENST00000362723.1_3_71_+ 3–71 2424.00 92.80 4.42 100.0 SNORD114-14-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000362883.1 ENST00000362883.1_35_70_+ 35–70 936.00 5.56 1.71 100.0 SNORD104-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000362883.1 ENST00000362883.1_10_70_+ 10–70 54.00 0.32 0.10 100.0 SNORD104-201 snoRNA esophagus squamous epithelium (Tissue)