ENCFF081QYT

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR289GGY
Description: Part of ENCODE experiment ENCSR289GGY. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 68.00 16.59 0.12 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 11.00 2.27 0.02 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 95.00 2.69 0.17 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 57.00 0.09 0.10 16.06 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 185.00 0.28 0.34 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 184.00 13.22 0.34 82.51 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 72.00 5.17 0.13 28.12 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 115.00 6.49 0.21 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 571.00 2.09 1.04 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 11552.00 42.23 21.09 86.85 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 16.00 2.19 0.03 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 11.00 3.10 0.02 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 19.00 0.14 0.03 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 47.00 1.43 0.09 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 11.00 0.34 0.02 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 136.00 4.15 0.25 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 41.00 1.25 0.07 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 223.00 6.80 0.41 91.02 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 50.00 1.52 0.09 35.21 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 1581.00 31.65 2.89 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 562.00 11.25 1.03 51.94 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 694.00 17.38 1.27 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 21.00 0.90 0.04 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 13.00 0.56 0.02 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 200.00 8.59 0.37 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA esophagus squamous epithelium (Tissue)