ENCFF081QYT

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR289GGY
Description: Part of ENCODE experiment ENCSR289GGY. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000849527.1 ENST00000849527.1_293_307_+ 293–307 261.00 12.71 0.48 100.0 ENST00000849527 lncRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_3_32_+ 3–32 3382.00 72.84 6.17 95.83 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_2_52_+ 2–52 82.00 1.77 0.15 100.0 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-121020729 tRNA-transcript-chr1-121020729_1_54_+ 1–54 158.00 0.73 0.29 100.0 TRNA-TRANSCRIPT-CHR1-121020729 Val tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_23_+ 1–23 333.00 63.19 0.61 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_33_+ 1–33 13.00 2.47 0.02 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 174.00 32.16 0.32 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 53.00 2.94 0.10 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 54.00 25.12 0.10 83.08 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 112.00 0.52 0.20 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-159141611 tRNA-transcript-chr1-159141611_3_20_+ 3–20 1.00 7.14 0.00 100.0 TRNA-TRANSCRIPT-CHR1-159141611 Arg tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 5411.00 68.51 9.88 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 189.00 2.39 0.34 90.43 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_32_53_+ 32–53 117.00 1.48 0.21 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 1000.00 43.50 1.83 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 505.00 1.83 0.92 80.16 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 54.00 0.20 0.10 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 1403.00 5.08 2.56 92.24 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 2727.00 9.88 4.98 42.74 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_72_+ 1–72 125.00 0.45 0.23 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 7.00 0.03 0.01 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 222.00 0.80 0.41 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 51.00 51.52 0.09 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 680.00 1.04 1.24 98.41 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 25.00 6.10 0.05 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA esophagus squamous epithelium (Tissue)