ENCFF081QYT

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR289GGY
Description: Part of ENCODE experiment ENCSR289GGY. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 217.00 9.32 0.40 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 1088.00 46.72 1.99 93.87 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 569.00 16.10 1.04 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 719.00 27.91 1.31 85.6 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-3191989 tRNA-transcript-chr16-3191989_31_53_+ 31–53 114.00 4.14 0.21 100.0 TRNA-TRANSCRIPT-CHR16-3191989 Pro tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 278.00 24.07 0.51 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 28.00 2.42 0.05 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 30.00 2.60 0.05 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_33_71_+ 33–71 113.00 9.78 0.21 64.2 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 446.00 0.50 0.81 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 40.00 11.87 0.07 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 346.00 13.13 0.63 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_32_53_+ 32–53 20.00 0.76 0.04 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 57.00 33.53 0.10 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 386.00 54.91 0.70 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 17.00 3.17 0.03 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 36.00 0.26 0.07 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 230.00 1.65 0.42 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 50.00 0.36 0.09 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 50.00 0.36 0.09 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 140.00 1.01 0.26 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 62.00 0.45 0.11 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 6480.00 7.21 11.83 96.06 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 93.00 0.10 0.17 67.39 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 47.00 0.05 0.09 68.12 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA esophagus squamous epithelium (Tissue)