ENCFF081QYT

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR289GGY
Description: Part of ENCODE experiment ENCSR289GGY. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000823279.1 ENST00000823279.1_109_169_+ 109–169 181.02 2.43 0.33 51.28 ENST00000823279 lncRNA esophagus squamous epithelium (Tissue)
ENST00000823279.1 ENST00000823279.1_103_169_+ 103–169 216.86 2.91 0.40 62.5 ENST00000823279 lncRNA esophagus squamous epithelium (Tissue)
ENST00000823279.1 ENST00000823279.1_86_169_+ 86–169 64.00 0.86 0.12 100.0 ENST00000823279 lncRNA esophagus squamous epithelium (Tissue)
ENST00000823279.1 ENST00000823279.1_78_169_+ 78–169 1744.00 23.43 3.18 99.6 ENST00000823279 lncRNA esophagus squamous epithelium (Tissue)
ENST00000823279.1 ENST00000823279.1_107_169_+ 107–169 253.78 3.41 0.46 46.06 ENST00000823279 lncRNA esophagus squamous epithelium (Tissue)
ENST00000823279.1 ENST00000823279.1_105_169_+ 105–169 178.48 2.40 0.33 30.0 ENST00000823279 lncRNA esophagus squamous epithelium (Tissue)
ENST00000823279.1 ENST00000823279.1_131_169_+ 131–169 215.00 2.89 0.39 76.79 ENST00000823279 lncRNA esophagus squamous epithelium (Tissue)
ENST00000823279.1 ENST00000823279.1_151_169_+ 151–169 95.33 1.28 0.17 34.92 ENST00000823279 lncRNA esophagus squamous epithelium (Tissue)
ENST00000823801.1 ENST00000823801.1_153_169_+ 153–169 236.19 3.17 0.43 71.57 ENST00000823801 lncRNA esophagus squamous epithelium (Tissue)
ENST00000827714.1 ENST00000827714.1_110_131_+ 110–131 303.00 18.09 0.55 22.05 ENST00000827714 lncRNA esophagus squamous epithelium (Tissue)
ENST00000827714.1 ENST00000827714.1_110_129_+ 110–129 1071.00 63.94 1.95 77.95 ENST00000827714 lncRNA esophagus squamous epithelium (Tissue)
ENST00000828033.1 ENST00000828033.1_252_318_+ 252–318 51960.00 82.81 94.85 100.0 GAS5-377 lncRNA esophagus squamous epithelium (Tissue)
ENST00000828033.1 ENST00000828033.1_252_322_+ 252–322 6697.00 10.67 12.22 100.0 GAS5-377 lncRNA esophagus squamous epithelium (Tissue)
ENST00000828033.1 ENST00000828033.1_278_318_+ 278–318 41.00 0.07 0.07 100.0 GAS5-377 lncRNA esophagus squamous epithelium (Tissue)
ENST00000828033.1 ENST00000828033.1_290_318_+ 290–318 2782.00 4.43 5.08 100.0 GAS5-377 lncRNA esophagus squamous epithelium (Tissue)
ENST00000830954.1 ENST00000830954.1_968_989_+ 968–989 24545.00 91.76 44.80 100.0 MIR205HG-245 lncRNA esophagus squamous epithelium (Tissue)
ENST00000836993.1 ENST00000836993.1_387_463_+ 387–463 271264.00 97.30 495.15 99.68 ZFAS1-238 lncRNA esophagus squamous epithelium (Tissue)
ENST00000836993.1 ENST00000836993.1_422_463_+ 422–463 77.00 0.03 0.14 100.0 ZFAS1-238 lncRNA esophagus squamous epithelium (Tissue)
ENST00000836993.1 ENST00000836993.1_402_463_+ 402–463 57.00 0.02 0.10 100.0 ZFAS1-238 lncRNA esophagus squamous epithelium (Tissue)
ENST00000836993.1 ENST00000836993.1_410_463_+ 410–463 2139.00 0.77 3.90 100.0 ZFAS1-238 lncRNA esophagus squamous epithelium (Tissue)
ENST00000836997.1 ENST00000836997.1_305_352_+ 305–352 7009.00 11.87 12.79 100.0 ZFAS1-242 lncRNA esophagus squamous epithelium (Tissue)
ENST00000836997.1 ENST00000836997.1_305_380_+ 305–380 50215.00 85.03 91.66 100.0 ZFAS1-242 lncRNA esophagus squamous epithelium (Tissue)
ENST00000837997.1 ENST00000837997.1_211_224_+ 211–224 124.00 24.90 0.23 100.0 ENST00000837997 lncRNA esophagus squamous epithelium (Tissue)
ENST00000837997.1 ENST00000837997.1_214_225_+ 214–225 125.00 25.10 0.23 100.0 ENST00000837997 lncRNA esophagus squamous epithelium (Tissue)
ENST00000839036.1 ENST00000839036.1_40_61_+ 40–61 3630.00 69.61 6.63 77.14 ENST00000839036 lncRNA esophagus squamous epithelium (Tissue)