ENCFF081QYT

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR289GGY
Description: Part of ENCODE experiment ENCSR289GGY. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000776279.1 ENST00000776279.1_161_234_+ 161–234 2904631.00 92.69 5301.98 93.68 SNHG25-206 lncRNA esophagus squamous epithelium (Tissue)
ENST00000776279.1 ENST00000776279.1_161_206_+ 161–206 889.00 0.03 1.62 100.0 SNHG25-206 lncRNA esophagus squamous epithelium (Tissue)
ENST00000776279.1 ENST00000776279.1_176_234_+ 176–234 324.82 0.01 0.59 51.23 SNHG25-206 lncRNA esophagus squamous epithelium (Tissue)
ENST00000776279.1 ENST00000776279.1_172_234_+ 172–234 439.82 0.01 0.80 58.18 SNHG25-206 lncRNA esophagus squamous epithelium (Tissue)
ENST00000776279.1 ENST00000776279.1_174_234_+ 174–234 414.59 0.01 0.76 34.49 SNHG25-206 lncRNA esophagus squamous epithelium (Tissue)
ENST00000776279.1 ENST00000776279.1_196_234_+ 196–234 5863.00 0.19 10.70 86.23 SNHG25-206 lncRNA esophagus squamous epithelium (Tissue)
ENST00000776279.1 ENST00000776279.1_184_234_+ 184–234 155.00 0.00 0.28 100.0 SNHG25-206 lncRNA esophagus squamous epithelium (Tissue)
ENST00000778783.1 ENST00000778783.1_84_171_+ 84–171 278.00 37.07 0.51 100.0 ENST00000778783 lncRNA esophagus squamous epithelium (Tissue)
ENST00000779378.1 ENST00000779378.1_905_928_+ 905–928 650.00 76.92 1.19 81.97 MIR155HG-205 lncRNA esophagus squamous epithelium (Tissue)
ENST00000784740.1 ENST00000784740.1_245_265_+ 245–265 16.00 76.19 0.03 100.0 ENST00000784740 lncRNA esophagus squamous epithelium (Tissue)
ENST00000785178.1 ENST00000785178.1_899_938_+ 899–938 73.00 2.83 0.13 100.0 ENST00000785178 lncRNA esophagus squamous epithelium (Tissue)
ENST00000786284.1 ENST00000786284.1_38_80_+ 38–80 9720.00 65.86 17.74 99.49 ENST00000786284 lncRNA esophagus squamous epithelium (Tissue)
ENST00000786284.1 ENST00000786284.1_46_80_+ 46–80 1075.00 7.28 1.96 100.0 ENST00000786284 lncRNA esophagus squamous epithelium (Tissue)
ENST00000786284.1 ENST00000786284.1_40_80_+ 40–80 50.00 0.34 0.09 6.31 ENST00000786284 lncRNA esophagus squamous epithelium (Tissue)
ENST00000788343.1 ENST00000788343.1_17_107_+ 17–107 2782.00 66.91 5.08 92.8 ENST00000788343 lncRNA esophagus squamous epithelium (Tissue)
ENST00000797550.1 ENST00000797550.1_7_63_+ 7–63 6100.63 48.48 11.14 59.06 ENST00000797550 lncRNA esophagus squamous epithelium (Tissue)
ENST00000797550.1 ENST00000797550.1_9_63_+ 9–63 4432.07 35.22 8.09 42.9 ENST00000797550 lncRNA esophagus squamous epithelium (Tissue)
ENST00000797550.1 ENST00000797550.1_9_52_+ 9–52 164.00 1.30 0.30 90.11 ENST00000797550 lncRNA esophagus squamous epithelium (Tissue)
ENST00000806893.1 ENST00000806893.1_425_447_+ 425–447 53335.00 87.89 97.36 93.56 MIR181A1HG-212 lncRNA esophagus squamous epithelium (Tissue)
ENST00000806893.1 ENST00000806893.1_465_486_+ 465–486 104.00 0.17 0.19 100.0 MIR181A1HG-212 lncRNA esophagus squamous epithelium (Tissue)
ENST00000812667.1 ENST00000812667.1_308_348_+ 308–348 301.00 23.10 0.55 100.0 C19orf48P-218 lncRNA esophagus squamous epithelium (Tissue)
ENST00000812667.1 ENST00000812667.1_307_393_+ 307–393 646.00 49.58 1.18 100.0 C19orf48P-218 lncRNA esophagus squamous epithelium (Tissue)
ENST00000815283.1 ENST00000815283.1_298_361_+ 298–361 6741.00 80.34 12.30 93.21 SNHG18-220 lncRNA esophagus squamous epithelium (Tissue)
ENST00000817026.1 ENST00000817026.1_659_679_+ 659–679 121.00 17.31 0.22 100.0 ENST00000817026 lncRNA esophagus squamous epithelium (Tissue)
ENST00000823279.1 ENST00000823279.1_126_169_+ 126–169 19.00 0.26 0.03 100.0 ENST00000823279 lncRNA esophagus squamous epithelium (Tissue)