ENCFF081QYT

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR289GGY
Description: Part of ENCODE experiment ENCSR289GGY. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000756452.1 ENST00000756452.1_116_129_+ 116–129 9.00 0.62 0.02 100.0 ENST00000756452 lncRNA esophagus squamous epithelium (Tissue)
ENST00000760093.1 ENST00000760093.1_80_108_+ 80–108 69.00 3.96 0.13 100.0 ENST00000760093 lncRNA esophagus squamous epithelium (Tissue)
ENST00000760093.1 ENST00000760093.1_77_108_+ 77–108 12.00 0.69 0.02 100.0 ENST00000760093 lncRNA esophagus squamous epithelium (Tissue)
ENST00000760397.1 ENST00000760397.1_331_421_+ 331–421 45452.00 90.25 82.97 92.59 SNHG14-356 lncRNA esophagus squamous epithelium (Tissue)
ENST00000762395.1 ENST00000762395.1_325_354_+ 325–354 1109.00 11.88 2.02 89.0 LINC02806-241 lncRNA esophagus squamous epithelium (Tissue)
ENST00000762395.1 ENST00000762395.1_325_377_+ 325–377 107.00 1.15 0.20 100.0 LINC02806-241 lncRNA esophagus squamous epithelium (Tissue)
ENST00000762395.1 ENST00000762395.1_397_430_+ 397–430 28.00 0.30 0.05 100.0 LINC02806-241 lncRNA esophagus squamous epithelium (Tissue)
ENST00000762395.1 ENST00000762395.1_324_357_+ 324–357 2004.00 21.47 3.66 82.71 LINC02806-241 lncRNA esophagus squamous epithelium (Tissue)
ENST00000762395.1 ENST00000762395.1_307_324_+ 307–324 809.00 8.67 1.48 100.0 LINC02806-241 lncRNA esophagus squamous epithelium (Tissue)
ENST00000766977.1 ENST00000766977.1_604_615_+ 604–615 656.00 88.65 1.20 100.0 EHBP1-AS1-210 lncRNA esophagus squamous epithelium (Tissue)
ENST00000770398.1 ENST00000770398.1_425_437_+ 425–437 1695.00 63.36 3.09 100.0 ENST00000770398 lncRNA esophagus squamous epithelium (Tissue)
ENST00000770398.1 ENST00000770398.1_481_509_+ 481–509 392.00 14.65 0.72 100.0 ENST00000770398 lncRNA esophagus squamous epithelium (Tissue)
ENST00000770398.1 ENST00000770398.1_425_456_+ 425–456 11.00 0.41 0.02 100.0 ENST00000770398 lncRNA esophagus squamous epithelium (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1611_+ 1591–1611 144.00 3.76 0.26 100.0 ENST00000771298 lncRNA esophagus squamous epithelium (Tissue)
ENST00000771298.1 ENST00000771298.1_448_479_+ 448–479 38.00 0.99 0.07 100.0 ENST00000771298 lncRNA esophagus squamous epithelium (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1621_+ 1591–1621 2395.00 62.60 4.37 94.4 ENST00000771298 lncRNA esophagus squamous epithelium (Tissue)
ENST00000771298.1 ENST00000771298.1_485_522_+ 485–522 81.00 2.12 0.15 100.0 ENST00000771298 lncRNA esophagus squamous epithelium (Tissue)
ENST00000772672.1 ENST00000772672.1_26_113_+ 26–113 1326.00 68.46 2.42 100.0 ENST00000772672 lncRNA esophagus squamous epithelium (Tissue)
ENST00000772672.1 ENST00000772672.1_21_113_+ 21–113 1.00 0.05 0.00 100.0 ENST00000772672 lncRNA esophagus squamous epithelium (Tissue)
ENST00000772672.1 ENST00000772672.1_91_113_+ 91–113 16.00 0.83 0.03 100.0 ENST00000772672 lncRNA esophagus squamous epithelium (Tissue)
ENST00000773843.1 ENST00000773843.1_422_435_+ 422–435 738.00 32.77 1.35 100.0 ENST00000773843 lncRNA esophagus squamous epithelium (Tissue)
ENST00000775062.1 ENST00000775062.1_1327_1402_+ 1327–1402 177.00 0.02 0.32 100.0 SNHG12-223 lncRNA esophagus squamous epithelium (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1392_+ 1328–1392 334790.00 46.77 611.11 92.31 SNHG12-223 lncRNA esophagus squamous epithelium (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1395_+ 1328–1395 378629.00 52.89 691.13 98.9 SNHG12-223 lncRNA esophagus squamous epithelium (Tissue)
ENST00000776279.1 ENST00000776279.1_205_232_+ 205–232 14230.00 0.45 25.97 100.0 SNHG25-206 lncRNA esophagus squamous epithelium (Tissue)