ENCFF081QYT

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR289GGY
Description: Part of ENCODE experiment ENCSR289GGY. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000738116.1 ENST00000738116.1_111_138_+ 111–138 1430.00 6.24 2.61 100.0 SNHG16-266 lncRNA esophagus squamous epithelium (Tissue)
ENST00000738116.1 ENST00000738116.1_64_97_+ 64–97 468.00 2.04 0.85 100.0 SNHG16-266 lncRNA esophagus squamous epithelium (Tissue)
ENST00000738116.1 ENST00000738116.1_88_138_+ 88–138 283.00 1.23 0.52 100.0 SNHG16-266 lncRNA esophagus squamous epithelium (Tissue)
ENST00000741826.1 ENST00000741826.1_184_205_+ 184–205 10.00 43.48 0.02 100.0 MEG8-261 lncRNA esophagus squamous epithelium (Tissue)
ENST00000743202.1 ENST00000743202.1_560_577_+ 560–577 202.00 36.27 0.37 100.0 NR2F2-AS1-327 lncRNA esophagus squamous epithelium (Tissue)
ENST00000747675.1 ENST00000747675.1_802_853_+ 802–853 249.00 1.37 0.45 42.78 ENST00000747675 lncRNA esophagus squamous epithelium (Tissue)
ENST00000747675.1 ENST00000747675.1_817_853_+ 817–853 2874.00 15.81 5.25 100.0 ENST00000747675 lncRNA esophagus squamous epithelium (Tissue)
ENST00000747675.1 ENST00000747675.1_800_853_+ 800–853 188.00 1.03 0.34 43.02 ENST00000747675 lncRNA esophagus squamous epithelium (Tissue)
ENST00000747675.1 ENST00000747675.1_804_853_+ 804–853 145.00 0.80 0.26 36.8 ENST00000747675 lncRNA esophagus squamous epithelium (Tissue)
ENST00000747675.1 ENST00000747675.1_812_853_+ 812–853 12747.00 70.12 23.27 100.0 ENST00000747675 lncRNA esophagus squamous epithelium (Tissue)
ENST00000748458.1 ENST00000748458.1_161_188_+ 161–188 17708.00 23.52 32.32 97.53 SNHG26-250 lncRNA esophagus squamous epithelium (Tissue)
ENST00000748458.1 ENST00000748458.1_161_230_+ 161–230 51532.00 68.45 94.06 98.39 SNHG26-250 lncRNA esophagus squamous epithelium (Tissue)
ENST00000752259.1 ENST00000752259.1_405_425_+ 405–425 123.00 12.49 0.22 100.0 LINC02422-207 lncRNA esophagus squamous epithelium (Tissue)
ENST00000753088.1 ENST00000753088.1_508_523_+ 508–523 211.00 9.17 0.39 100.0 ENST00000753088 lncRNA esophagus squamous epithelium (Tissue)
ENST00000753088.1 ENST00000753088.1_508_542_+ 508–542 24.00 1.04 0.04 100.0 ENST00000753088 lncRNA esophagus squamous epithelium (Tissue)
ENST00000756336.1 ENST00000756336.1_98_127_+ 98–127 269.05 0.89 0.49 47.28 ENST00000756336 lncRNA esophagus squamous epithelium (Tissue)
ENST00000756336.1 ENST00000756336.1_133_172_+ 133–172 4069.00 13.41 7.43 100.0 ENST00000756336 lncRNA esophagus squamous epithelium (Tissue)
ENST00000756336.1 ENST00000756336.1_117_172_+ 117–172 899.00 2.96 1.64 100.0 ENST00000756336 lncRNA esophagus squamous epithelium (Tissue)
ENST00000756336.1 ENST00000756336.1_137_172_+ 137–172 211.00 0.70 0.39 100.0 ENST00000756336 lncRNA esophagus squamous epithelium (Tissue)
ENST00000756336.1 ENST00000756336.1_98_132_+ 98–132 371.45 1.22 0.68 30.62 ENST00000756336 lncRNA esophagus squamous epithelium (Tissue)
ENST00000756336.1 ENST00000756336.1_98_130_+ 98–130 945.38 3.12 1.73 66.86 ENST00000756336 lncRNA esophagus squamous epithelium (Tissue)
ENST00000756336.1 ENST00000756336.1_107_172_+ 107–172 818.23 2.70 1.49 27.47 ENST00000756336 lncRNA esophagus squamous epithelium (Tissue)
ENST00000756336.1 ENST00000756336.1_98_125_+ 98–125 143.19 0.47 0.26 43.13 ENST00000756336 lncRNA esophagus squamous epithelium (Tissue)
ENST00000756336.1 ENST00000756336.1_98_172_+ 98–172 14939.00 49.23 27.27 100.0 ENST00000756336 lncRNA esophagus squamous epithelium (Tissue)
ENST00000756336.1 ENST00000756336.1_109_172_+ 109–172 3249.27 10.71 5.93 78.77 ENST00000756336 lncRNA esophagus squamous epithelium (Tissue)