ENCFF081QYT

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR289GGY
Description: Part of ENCODE experiment ENCSR289GGY. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000655317.2 ENST00000655317.2_283_352_+ 283–352 8341.00 33.56 15.23 80.09 ENST00000655317 lncRNA esophagus squamous epithelium (Tissue)
ENST00000655317.2 ENST00000655317.2_271_353_+ 271–353 1865.00 7.50 3.40 100.0 ENST00000655317 lncRNA esophagus squamous epithelium (Tissue)
ENST00000655600.1 ENST00000655600.1_807_842_+ 807–842 157.00 4.13 0.29 93.45 LINC01962-202 lncRNA esophagus squamous epithelium (Tissue)
ENST00000655600.1 ENST00000655600.1_807_839_+ 807–839 1700.00 44.71 3.10 100.0 LINC01962-202 lncRNA esophagus squamous epithelium (Tissue)
ENST00000655600.1 ENST00000655600.1_807_829_+ 807–829 220.00 5.79 0.40 100.0 LINC01962-202 lncRNA esophagus squamous epithelium (Tissue)
ENST00000655965.1 ENST00000655965.1_2745_2837_+ 2745–2837 4802.00 43.76 8.77 90.5 SNHG14-241 lncRNA esophagus squamous epithelium (Tissue)
ENST00000656987.1 ENST00000656987.1_14_79_+ 14–79 9198.00 97.12 16.79 100.0 MEG8-228 lncRNA esophagus squamous epithelium (Tissue)
ENST00000657237.1 ENST00000657237.1_1408_1496_+ 1408–1496 934.00 25.92 1.70 100.0 SNHG14-254 lncRNA esophagus squamous epithelium (Tissue)
ENST00000658769.1 ENST00000658769.1_2_96_+ 2–96 1581.00 30.84 2.89 100.0 SNHG14-261 lncRNA esophagus squamous epithelium (Tissue)
ENST00000658769.1 ENST00000658769.1_810_903_+ 810–903 1710.00 33.35 3.12 87.16 SNHG14-261 lncRNA esophagus squamous epithelium (Tissue)
ENST00000658801.2 ENST00000658801.2_139_171_+ 139–171 51.00 1.11 0.09 100.0 LIMD1-AS1-204 lncRNA esophagus squamous epithelium (Tissue)
ENST00000658801.2 ENST00000658801.2_139_214_+ 139–214 1943.00 42.44 3.55 100.0 LIMD1-AS1-204 lncRNA esophagus squamous epithelium (Tissue)
ENST00000658801.2 ENST00000658801.2_178_214_+ 178–214 537.00 11.73 0.98 88.76 LIMD1-AS1-204 lncRNA esophagus squamous epithelium (Tissue)
ENST00000659483.3 ENST00000659483.3_1071_1093_+ 1071–1093 10863.00 65.51 19.83 85.84 MIR99AHG-262 lncRNA esophagus squamous epithelium (Tissue)
ENST00000659483.3 ENST00000659483.3_1110_1131_+ 1110–1131 1935.00 11.67 3.53 100.0 MIR99AHG-262 lncRNA esophagus squamous epithelium (Tissue)
ENST00000660376.1 ENST00000660376.1_1_78_+ 1–78 4.00 3.08 0.01 100.0 SNHG14-266 lncRNA esophagus squamous epithelium (Tissue)
ENST00000660956.1 ENST00000660956.1_2_92_+ 2–92 249.00 78.55 0.45 100.0 SNHG14-270 lncRNA esophagus squamous epithelium (Tissue)
ENST00000661541.1 ENST00000661541.1_446_534_+ 446–534 132.00 0.50 0.24 100.0 SNHG14-275 lncRNA esophagus squamous epithelium (Tissue)
ENST00000661688.1 ENST00000661688.1_928_950_+ 928–950 53.00 70.67 0.10 92.98 MIR9-2HG-225 lncRNA esophagus squamous epithelium (Tissue)
ENST00000661815.1 ENST00000661815.1_36_69_+ 36–69 233.00 26.75 0.43 100.0 MEG8-233 lncRNA esophagus squamous epithelium (Tissue)
ENST00000661815.1 ENST00000661815.1_2_70_+ 2–70 369.00 42.37 0.67 100.0 MEG8-233 lncRNA esophagus squamous epithelium (Tissue)
ENST00000661889.1 ENST00000661889.1_1145_1233_+ 1145–1233 783.00 2.82 1.43 100.0 SNHG14-278 lncRNA esophagus squamous epithelium (Tissue)
ENST00000661889.1 ENST00000661889.1_2_92_+ 2–92 23391.00 84.17 42.70 91.31 SNHG14-278 lncRNA esophagus squamous epithelium (Tissue)
ENST00000662228.1 ENST00000662228.1_1206_1269_+ 1206–1269 1101.00 58.97 2.01 100.0 MEG8-234 lncRNA esophagus squamous epithelium (Tissue)
ENST00000662228.1 ENST00000662228.1_1205_1272_+ 1205–1272 151.00 8.09 0.28 100.0 MEG8-234 lncRNA esophagus squamous epithelium (Tissue)