ENCFF081QYT

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR289GGY
Description: Part of ENCODE experiment ENCSR289GGY. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000651540.1 ENST00000651540.1_6_33_+ 6–33 1149.00 3.56 2.10 54.87 ENST00000651540 lncRNA esophagus squamous epithelium (Tissue)
ENST00000651540.1 ENST00000651540.1_70_88_+ 70–88 32.00 0.10 0.06 100.0 ENST00000651540 lncRNA esophagus squamous epithelium (Tissue)
ENST00000651540.1 ENST00000651540.1_6_75_+ 6–75 73.00 0.23 0.13 100.0 ENST00000651540 lncRNA esophagus squamous epithelium (Tissue)
ENST00000651540.1 ENST00000651540.1_6_79_+ 6–79 423.00 1.31 0.77 100.0 ENST00000651540 lncRNA esophagus squamous epithelium (Tissue)
ENST00000651540.1 ENST00000651540.1_6_28_+ 6–28 35.00 0.11 0.06 100.0 ENST00000651540 lncRNA esophagus squamous epithelium (Tissue)
ENST00000651540.1 ENST00000651540.1_6_88_+ 6–88 163.00 0.51 0.30 100.0 ENST00000651540 lncRNA esophagus squamous epithelium (Tissue)
ENST00000651540.1 ENST00000651540.1_6_36_+ 6–36 4756.00 14.75 8.68 53.38 ENST00000651540 lncRNA esophagus squamous epithelium (Tissue)
ENST00000651540.1 ENST00000651540.1_6_51_+ 6–51 77.00 0.24 0.14 100.0 ENST00000651540 lncRNA esophagus squamous epithelium (Tissue)
ENST00000651540.1 ENST00000651540.1_6_39_+ 6–39 10598.00 32.86 19.35 79.37 ENST00000651540 lncRNA esophagus squamous epithelium (Tissue)
ENST00000652769.2 ENST00000652769.2_3101_3122_+ 3101–3122 3248.00 1.46 5.93 100.0 MIRLET7A1HG-203 lncRNA esophagus squamous epithelium (Tissue)
ENST00000653102.1 ENST00000653102.1_9_77_+ 9–77 2350.00 94.30 4.29 100.0 MEG8-225 lncRNA esophagus squamous epithelium (Tissue)
ENST00000654356.2 ENST00000654356.2_1000_1070_+ 1000–1070 114751.00 78.12 209.46 100.0 SNHG29-232 lncRNA esophagus squamous epithelium (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1394_+ 1368–1394 196.00 0.13 0.36 100.0 SNHG29-232 lncRNA esophagus squamous epithelium (Tissue)
ENST00000654356.2 ENST00000654356.2_1402_1442_+ 1402–1442 341.00 0.23 0.62 100.0 SNHG29-232 lncRNA esophagus squamous epithelium (Tissue)
ENST00000654356.2 ENST00000654356.2_1393_1442_+ 1393–1442 5.00 0.00 0.01 100.0 SNHG29-232 lncRNA esophagus squamous epithelium (Tissue)
ENST00000654356.2 ENST00000654356.2_469_540_+ 469–540 13986.00 9.52 25.53 100.0 SNHG29-232 lncRNA esophagus squamous epithelium (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1442_+ 1368–1442 14922.00 10.16 27.24 100.0 SNHG29-232 lncRNA esophagus squamous epithelium (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3153_+ 3091–3153 126.00 0.45 0.23 100.0 SNHG14-234 lncRNA esophagus squamous epithelium (Tissue)
ENST00000655143.1 ENST00000655143.1_1868_1961_+ 1868–1961 11145.00 39.80 20.34 95.92 SNHG14-234 lncRNA esophagus squamous epithelium (Tissue)
ENST00000655143.1 ENST00000655143.1_80_95_+ 80–95 32.00 0.11 0.06 100.0 SNHG14-234 lncRNA esophagus squamous epithelium (Tissue)
ENST00000655143.1 ENST00000655143.1_682_775_+ 682–775 2802.00 10.01 5.11 100.0 SNHG14-234 lncRNA esophagus squamous epithelium (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3184_+ 3091–3184 3640.00 13.00 6.64 100.0 SNHG14-234 lncRNA esophagus squamous epithelium (Tissue)
ENST00000655143.1 ENST00000655143.1_2_94_+ 2–94 5787.00 20.67 10.56 92.7 SNHG14-234 lncRNA esophagus squamous epithelium (Tissue)
ENST00000655317.2 ENST00000655317.2_281_353_+ 281–353 882.00 3.55 1.61 14.98 ENST00000655317 lncRNA esophagus squamous epithelium (Tissue)
ENST00000655317.2 ENST00000655317.2_293_352_+ 293–352 2519.00 10.14 4.60 100.0 ENST00000655317 lncRNA esophagus squamous epithelium (Tissue)