ENCFF081QYT

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR289GGY
Description: Part of ENCODE experiment ENCSR289GGY. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385301.1 ENST00000385301.1_12_32_+ 12–32 29.00 11.20 0.05 100.0 MIR106B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 68.00 26.25 0.12 57.14 MIR106B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000386747.1 ENST00000386747.1_4_90_+ 4–90 43788.00 42.60 79.93 97.02 SNORD83A-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000386747.1 ENST00000386747.1_4_93_+ 4–93 56009.00 54.50 102.24 98.26 SNORD83A-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 20492.00 79.70 37.41 100.0 SNORD41-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 108.00 12.33 0.20 49.54 MT-TF-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 7.00 0.80 0.01 100.0 MT-TF-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 15.00 1.71 0.03 42.86 MT-TF-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 702.00 23.32 1.28 100.0 MT-TV-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 206.00 0.57 0.38 100.0 MT-RNR2-201 Mt rRNA esophagus squamous epithelium (Tissue)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 184.00 0.51 0.34 100.0 MT-RNR2-201 Mt rRNA esophagus squamous epithelium (Tissue)
ENST00000387347.2 ENST00000387347.2_74_96_+ 74–96 7.00 0.02 0.01 100.0 MT-RNR2-201 Mt rRNA esophagus squamous epithelium (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 5252.00 14.59 9.59 76.17 MT-RNR2-201 Mt rRNA esophagus squamous epithelium (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1531_+ 1500–1531 10141.00 28.16 18.51 95.63 MT-RNR2-201 Mt rRNA esophagus squamous epithelium (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 2122.00 5.89 3.87 100.0 MT-RNR2-201 Mt rRNA esophagus squamous epithelium (Tissue)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 196.00 0.54 0.36 100.0 MT-RNR2-201 Mt rRNA esophagus squamous epithelium (Tissue)
ENST00000387365.1 ENST00000387365.1_1_51_+ 1–51 82.00 12.15 0.15 91.11 MT-TI-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387365.1 ENST00000387365.1_1_58_+ 1–58 200.00 29.63 0.37 100.0 MT-TI-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387372.1 ENST00000387372.1_1_32_+ 1–32 1634.64 9.81 2.98 51.11 MT-TQ-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387372.1 ENST00000387372.1_1_55_+ 1–55 11.00 0.07 0.02 100.0 MT-TQ-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387372.1 ENST00000387372.1_1_36_+ 1–36 10135.00 60.79 18.50 91.54 MT-TQ-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387372.1 ENST00000387372.1_1_30_+ 1–30 1237.72 7.42 2.26 59.76 MT-TQ-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387377.1 ENST00000387377.1_1_51_+ 1–51 86.00 4.20 0.16 100.0 MT-TM-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387377.1 ENST00000387377.1_1_31_+ 1–31 785.00 38.37 1.43 81.6 MT-TM-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387405.1 ENST00000387405.1_1_24_+ 1–24 92.00 28.13 0.17 100.0 MT-TC-201 Mt tRNA esophagus squamous epithelium (Tissue)