ENCFF081QYT

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR289GGY
Description: Part of ENCODE experiment ENCSR289GGY. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387409.1 ENST00000387409.1_1_37_+ 1–37 2582.00 12.07 4.71 83.42 MT-TY-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387409.1 ENST00000387409.1_1_32_+ 1–32 3343.00 15.63 6.10 81.64 MT-TY-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387409.1 ENST00000387409.1_1_50_+ 1–50 2.00 0.01 0.00 100.0 MT-TY-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387409.1 ENST00000387409.1_1_28_+ 1–28 380.00 1.78 0.69 100.0 MT-TY-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387409.1 ENST00000387409.1_1_65_+ 1–65 13315.00 62.25 24.30 100.0 MT-TY-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387409.1 ENST00000387409.1_1_56_+ 1–56 24.00 0.11 0.04 100.0 MT-TY-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387419.1 ENST00000387419.1_1_51_+ 1–51 5.00 7.69 0.01 100.0 MT-TD-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387421.1 ENST00000387421.1_1_58_+ 1–58 1859.00 33.24 3.39 100.0 MT-TK-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387421.1 ENST00000387421.1_1_31_+ 1–31 47.00 0.84 0.09 100.0 MT-TK-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387421.1 ENST00000387421.1_1_52_+ 1–52 1589.00 28.41 2.90 100.0 MT-TK-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387421.1 ENST00000387421.1_1_28_+ 1–28 109.00 1.95 0.20 100.0 MT-TK-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387449.1 ENST00000387449.1_1_26_+ 1–26 189.00 4.83 0.34 100.0 MT-TS2-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387449.1 ENST00000387449.1_1_53_+ 1–53 209.00 5.35 0.38 100.0 MT-TS2-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387449.1 ENST00000387449.1_1_20_+ 1–20 241.00 6.17 0.44 86.38 MT-TS2-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387456.1 ENST00000387456.1_1_31_+ 1–31 131.00 14.10 0.24 100.0 MT-TL2-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387459.1 ENST00000387459.1_24_69_+ 24–69 4.00 0.01 0.01 100.0 MT-TE-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387459.1 ENST00000387459.1_1_69_+ 1–69 62617.00 87.67 114.30 93.99 MT-TE-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387459.1 ENST00000387459.1_1_57_+ 1–57 192.00 0.27 0.35 100.0 MT-TE-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387459.1 ENST00000387459.1_40_67_+ 40–67 199.00 0.28 0.36 98.03 MT-TE-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387459.1 ENST00000387459.1_39_69_+ 39–69 4.00 0.01 0.01 2.47 MT-TE-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387459.1 ENST00000387459.1_13_67_+ 13–67 47.00 0.07 0.09 100.0 MT-TE-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000387459.1 ENST00000387459.1_1_62_+ 1–62 304.00 0.43 0.55 86.12 MT-TE-201 Mt tRNA esophagus squamous epithelium (Tissue)
ENST00000388006.1 ENST00000388006.1_7_28_+ 7–28 10.00 83.33 0.02 100.0 MIR196A1-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000389680.2 ENST00000389680.2_2_90_+ 2–90 6110.00 24.90 11.15 100.0 MT-RNR1-201 Mt rRNA esophagus squamous epithelium (Tissue)
ENST00000389680.2 ENST00000389680.2_316_354_+ 316–354 2012.00 8.20 3.67 100.0 MT-RNR1-201 Mt rRNA esophagus squamous epithelium (Tissue)